Gene
RNA
| Item | Value |
|---|---|
| gene id | G1114364 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 78565836 ~ 78566277 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: fas-binding factor 1 homolog |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1267057 | True | 318 | lncRNA | 0.54 | 2 | 78565836 | 78566277 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937919 | NA | coding | upstream | 9944 | 78555820 ~ 78555892 (+) |
| LOC110538512 | LOC106607014 | coding | upstream | 37449 | 78515170 ~ 78528387 (+) |
| ddx5 | LOC106601397 | coding | upstream | 63366 | 78496948 ~ 78502470 (+) |
| LOC110538510 | LOC106601396 | coding | upstream | 76291 | 78421508 ~ 78489545 (+) |
| LOC110538509 | LOC106607066 | coding | upstream | 144637 | 78417929 ~ 78421199 (+) |
| LOC110538516 | LOC106606986 | coding | downstream | 29249 | 78595526 ~ 78606605 (+) |
| LOC110538520 | LOC106601405 | coding | downstream | 114599 | 78680876 ~ 78769720 (+) |
| LOC110538521 | LOC106606997 | coding | downstream | 240984 | 78807261 ~ 78827498 (+) |
| pecam1 | peca1 | coding | downstream | 437920 | 79004197 ~ 79011770 (+) |
| LOC110538524 | LOC106601424 | coding | downstream | 474572 | 79040849 ~ 79043672 (+) |
| G1114355 | NA | non-coding | upstream | 9282 | 78554910 ~ 78556554 (+) |
| G1114341 | NA | non-coding | upstream | 29964 | 78535010 ~ 78535872 (+) |
| G1114305 | NA | non-coding | upstream | 149386 | 78416211 ~ 78416450 (+) |
| G1114261 | NA | non-coding | upstream | 180826 | 78364115 ~ 78385010 (+) |
| G1114365 | NA | non-coding | downstream | 65 | 78566342 ~ 78567061 (+) |
| G1114394 | NA | non-coding | downstream | 47049 | 78613326 ~ 78613557 (+) |
| G1114397 | NA | non-coding | downstream | 53775 | 78620052 ~ 78620273 (+) |
| G1114403 | NA | non-coding | downstream | 62914 | 78629191 ~ 78660873 (+) |
| G1114411 | NA | non-coding | downstream | 75259 | 78641536 ~ 78642213 (+) |
| LOC110538485 | smarca4 | other | upstream | 715031 | 77845399 ~ 77864078 (+) |
| G1113968 | NA | other | upstream | 746215 | 77774218 ~ 77819621 (+) |
| G1113861 | LOC100136012 | other | upstream | 940840 | 77591721 ~ 77624996 (+) |
| LOC110538313 | LOC106601291 | other | upstream | 1833718 | 76730857 ~ 76732118 (+) |
| LOC100136171 | LOC100136171 | other | upstream | 2095609 | 76464742 ~ 76470326 (+) |
| LOC110486564 | LOC106601427 | other | downstream | 483728 | 79049969 ~ 79053051 (+) |
| G1115550 | LOC106601417 | other | downstream | 508389 | 79074666 ~ 79077216 (+) |
| slc9a3r1b | LOC106601421 | other | downstream | 625739 | 79161938 ~ 79196532 (+) |
| G1115610 | NA | other | downstream | 637063 | 79203340 ~ 79204836 (+) |
| G1115707 | NA | other | downstream | 810389 | 79376666 ~ 79377080 (+) |
