G1118433


Basic Information

Item Value
gene id G1118433
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 81725608 ~ 81728012 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1271715
CTTAGACTGGAGGGTCTGCACGTGGCCTGGTTACGAGGCTGTCAGAGAACCCACAAGGTGACAAGGCTAAGTCGATACCAAACTACAAGATCTTGGCCCTCCACAGAAGACTGCAGtctgttaacctctctgggatatgtgggacggtagcatcccacctcgccaacagccagtgaaattgcagggtgccaaattcaaaactgaaatcccataattaaaattcctcaaacaagtATTTTACAtgattttaaagataaacttcttgtaaatccagccacagtgtccgattttcaTATGGGCTTtgtggcgaaagcacaccaaacgattatgttaggtcagcacctagccacagaaaaccatagggccattttccagccaaggagagcccTCAGTCAGAAATAGAAATTAAATAAAcatttgatcttcatcagatggcactcccaggactgCCGTGTTACTTCTCAATGCAActgctgtcagatttcaaaaaggctttacggcaaaagcgcATCGATTATTTGAGGTCagcacctagccacagaaaaacatacagccattttccaaaggaggtgtcacaagtcagaaatagcattataaatattcacttacctttgatctttaccagaatgcactcccaggaatcccagttccacaaatgtttgttttgttcgataaagtccatttatgtccaaatagctcttGTTTGcgtgtttagttcacaaatccaaactcacgaggcgcgggATAGTCCAGGCGCAAATTCAGACAGTCCAAAAAGTTCTGTAACAGGTCGTAGAAATGTCAAACGacgtatagaatcaatctttaggatgtttttatcataaatattcaataatatttcaattcctttgtctttagaaatgcaatagAATGCAGCTAACTCTCGGGCATGAGCGAGACTGAgttcatggcactctgccagacacctggctcaaacaaggttctaaagatactcacagacatcattcaagcagttttagaaacttcggagtgttttcaattcaaatctactaattatattcATAATCTAGCTTTTGAGCCTgcgtagcaggcagtttactctgggcacctgcTTATCCAAACCACTCAGTACTGCCCCCCAGTACCAAAGAAGTtaacatggggtgagatcttTAATGGATTATTTAGGGGCCTGTGTTTTGCACGAGGCACTTTTACCTGTATTTCCAGAATTATCCAGCTGGTGTCACTTCAGTcccttttttttaaatccaccaGCTCACCAATTTATCAAAGCAATAAGGATTATTTCCCCAACATGACCAAGATTGTGAAACAATATCCCTTTTGCTAATAATTCTGTAGATGTGGGAAGAATTGTTAATACCAGGGCTGACTCAGCAATGGAAATGTGCTGACCTAAGTGAGAATTTATTATTTATGTTCCTGATTATGTAAGGCTGAAACATTAAAATATTTGAATCAGA
>TU1271716
GCTCTCTGGCTCTGACAGGCCCGAGTCTGAGGATGCTCGCGTCTACTGTAGTTAGTCTTGTCTGCTTGATTGTCCGTTGCAGATATTGTCCTTATGGCAGTCTTTTTCTATTGTCCAAAGGTTACGAGGCTGTCAGAGAACCCACAAGGTGACAAGGCTAAGTCGATACCAAACTACAAGATCTTGGCCCTCCACAGAAGACTGCAGtctgttaacctctctgggatatgtgggacggtagcatcccacctcgccaacagccagtgaaattgcagggtgccaaattcaaaactgaaatcccataattaaaattcctcaaacaagtATTTTACAtgattttaaagataaacttcttgtaaatccagccacagtgtccgattttcaTATGGGCTTtgtggcgaaagcacaccaaacgattatgttaggtcagcacctagccacagaaaaccatagggccattttccagccaaggagagcccTCAGTCAGAAATAGAAATTAAATAAAcatttgatcttcatcagatggcactcccaggactgCCGTGTTACTTCTCAATGCAActgctgtcagatttcaaaaaggctttacggcaaaagcgcATCGATTATTTGAGGTCagcacctagccacagaaaaacatacagccattttccaaaggaggtgtcacaagtcagaaatagcattataaatattcacttacctttgatctttaccagaatgcactcccaggaatcccagttccacaaatgtttgttttgttcgataaagtccatttatgtccaaatagctcttGTTTGcgtgtttagttcacaaatccaaactcacgaggcgcgggATAGTCCAGGCGCAAATTCAGACAGTCCAAAAAGTTCTGTAACAGGTCGTAGAAATGTCAAACGacgtatagaatcaatctttaggatgtttttatcataaatattcaataatatttcaattcctttgtctttagaaatgcaatagAATGCAGCTAACTCTCGGGCATGAGCGAGACTGAgttcatggcactctgccagacacctggctcaaacaaggttctaaagatactcacagacatcattcaagcagttttagaaacttcggagtgttttcaattcaaatctactaattatattcATAATCTAGCTTTTGAGCCTgcgtagcaggcagtttactctgggcacctgcTTATCCAAACCACTCAGTACTGCCCCCCAGTACCAAAGAAGTtaacatggggtgagatcttTAATGGATTATTTAGGGGCCTGTGTTTTGCACGAGGCACTTTTACCTGTATTTCCAGAATTATCCAGCTGGTGTCACTTCAGTcccttttttttaaatccaccaGCTCACCAATTTATCAAAGCAATAAGGATTATTTCCCCAACATGACCAAGATTGTGAAACAATATCCCTTTTGCTAATAATTCTGTAGATGTGGGAAGAATTGTTAATACCAGGGCTGACTCAGCAATGGAAATGTGCTGACCTAAGTGAGAATTTATTATTTATGTTCCTGATTATGTAAGGCTGAAACATTAAAATATTTGAATCAGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1271715 False 1469 TUCP 0.41 4 81725608 81728012
TU1271716 True 1560 TUCP 0.41 3 81726055 81728012
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Neighbor

gene id symbol gene type direction distance location
mybpc2a LOC106601538 coding upstream 184735 81483350 ~ 81540873 (+)
LOC110538608 LOC106601546 coding upstream 273103 81448900 ~ 81452505 (+)
LOC118937826 NA coding upstream 372587 81349425 ~ 81353021 (+)
LOC110538603 LOC106601548 coding upstream 376398 81336042 ~ 81349210 (+)
LOC110538602 LOC106601551 coding upstream 425373 81290362 ~ 81300235 (+)
LOC110538622 LOC106606881 coding downstream 164104 81892116 ~ 81895379 (+)
prf1 prf1 coding downstream 196858 81924870 ~ 81928078 (+)
LOC100335037 LOC106606889 coding downstream 249723 81977678 ~ 81980288 (+)
LOC110538628 LOC106606892 coding downstream 262867 81990879 ~ 81992395 (+)
LOC110538634 NA coding downstream 321484 82049496 ~ 82052478 (+)
G1118432 NA non-coding upstream 196 81725129 ~ 81725412 (+)
G1118425 NA non-coding upstream 6465 81717253 ~ 81719143 (+)
G1118379 NA non-coding upstream 11464 81625319 ~ 81714144 (+)
G1118401 NA non-coding upstream 72587 81652442 ~ 81653021 (+)
G1118377 NA non-coding upstream 100344 81623157 ~ 81625264 (+)
G1118436 NA non-coding downstream 14298 81742310 ~ 81742652 (+)
G1118437 NA non-coding downstream 17002 81745014 ~ 81745443 (+)
G1118438 NA non-coding downstream 18484 81746496 ~ 81746926 (+)
G1118440 NA non-coding downstream 29201 81757213 ~ 81757508 (+)
G1118441 NA non-coding downstream 31813 81759825 ~ 81760044 (+)
G1118337 NA other upstream 133377 81551279 ~ 81592231 (+)
G1118287 NA other upstream 255921 81469306 ~ 81469687 (+)
G1118102 LOC106593559 other upstream 414104 81308626 ~ 81311504 (+)
G1117311 reco other upstream 1032866 80690776 ~ 80692742 (+)
G1118488 NA other downstream 167478 81895490 ~ 81896290 (+)
LOC110538650 ndua4 other downstream 617196 82345174 ~ 82373637 (+)
LOC100136955 LOC100136955 other downstream 1070216 82788554 ~ 82799768 (+)
G1118965 NA other downstream 1157975 82885987 ~ 82886964 (+)

Expression

G1118433 Expression in all Baseline Samples

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Co-expression Network