G1118488


Basic Information

Item Value
gene id G1118488
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 81895490 ~ 81896290 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1271785
TTTATTTCCAACTATGTAAGAGCATATATTAAAAACAAGTCTCTATAAATGGGAAAACTGACACCAACAAAACAAATTCAAGCTTCCAGACCCAAAAATATTTGGCTGCTGATATTGATGGATCCTGTCTCCAACTCTCCCTTTAAACATCCCCAACTATTTATAACTATTTTACTTTCATCTCCTCTTTATCTTCTCCTCTTTacacctccttctctctctccatcagctcCATCTCGAACCCAATGGCTCTGTTTCAATTCTTGCTCTCCAGTTTGCTCACGCGCTTGGTCAGCTCCTCTACTGTTTCCTTCAGAGCCTTCACCTCCTTCTGCAAGGCATGcacctcctgagagagagagagagagagagagagagagagagagagagaaagaaagaaagatagatagatagagacaaaaaagagaaagaaaacagagagagagagagagagagagaaggagaggggagattcCTGGTGAAATGTGCAAAAGAGGAAGCCATATCTAAAATACAGTATCTATTCACAGATATATCAAAGCATGTAGGTAGATGCAGCCATGTCCTTACCCCAGTGTTATCGTGCTGATGCCCCATGGCTGCTGATGTGGTCTTCAGAAGACTTttgtgaactttgaactctttgGATTTGGTGGTTGTCGCAAAACCGTCCTTCAAGGAGATCAGGATAGGTTGGCCCTCTTTGCCTTCAAACCACTCATTGGCCTCCACAGACGGCTCTGGACCCATGGTGTCTGGGTACAAATCCTCCTGAAACA

Function

NR:

description
coronin-1A-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1271785 True 779 TUCP 0.43 2 81895490 81896290
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110538622 LOC106606881 coding upstream 111 81892116 ~ 81895379 (+)
LOC110538618 NA coding upstream 167478 81725570 ~ 81728012 (+)
LOC118937941 NA coding upstream 168926 81726477 ~ 81726564 (+)
LOC118937942 NA coding upstream 169170 81726233 ~ 81726320 (+)
LOC118937943 NA coding upstream 169399 81726004 ~ 81726091 (+)
prf1 prf1 coding downstream 28580 81924870 ~ 81928078 (+)
LOC100335037 LOC106606889 coding downstream 81445 81977678 ~ 81980288 (+)
LOC110538628 LOC106606892 coding downstream 94589 81990879 ~ 81992395 (+)
LOC110538634 NA coding downstream 153206 82049496 ~ 82052478 (+)
zgc:153733 LOC106601591 coding downstream 172238 82068528 ~ 82073842 (+)
G1118511 NA non-coding upstream 9941 81885254 ~ 81885549 (+)
G1118485 NA non-coding upstream 10776 81884217 ~ 81884714 (+)
G1118504 NA non-coding upstream 25381 81869900 ~ 81870109 (+)
G1118492 NA non-coding upstream 39902 81854580 ~ 81855588 (+)
G1118516 NA non-coding downstream 9887 81906177 ~ 81908875 (+)
G1118526 NA non-coding downstream 39883 81936173 ~ 81937911 (+)
G1118537 NA non-coding downstream 56009 81952299 ~ 81952562 (+)
G1118539 NA non-coding downstream 56743 81953033 ~ 81954137 (+)
G1118559 NA non-coding downstream 99225 81995515 ~ 81997448 (+)
G1118433 NA other upstream 167478 81725608 ~ 81728012 (+)
G1118379 NA other upstream 181416 81625319 ~ 81714144 (+)
G1118337 NA other upstream 303259 81551279 ~ 81592231 (+)
G1118287 NA other upstream 425803 81469306 ~ 81469687 (+)
G1118102 LOC106593559 other upstream 583986 81308626 ~ 81311504 (+)
LOC110538650 ndua4 other downstream 448918 82345174 ~ 82373637 (+)
LOC100136955 LOC100136955 other downstream 901938 82788554 ~ 82799768 (+)
G1118965 NA other downstream 989697 82885987 ~ 82886964 (+)
LOC110538671 LOC105013089 other downstream 1545358 83441564 ~ 83450114 (+)

Expression

G1118488 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
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G1118488 Expression in each Bioproject

Bar chart with 18 bars.
G1118488 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
End of interactive chart.

Co-expression Network