Gene
RNA
| Item | Value |
|---|---|
| gene id | G1119157 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 83176244 ~ 83176744 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1272558 | True | 428 | lncRNA | 0.50 | 2 | 83176244 | 83176744 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538662 | LOC106601646 | coding | upstream | 329540 | 82838617 ~ 82846704 (+) |
| LOC110538655 | atxn7l3 | coding | upstream | 343034 | 82821020 ~ 82833210 (+) |
| LOC110538654 | ubtf | coding | upstream | 355474 | 82799993 ~ 82820770 (+) |
| LOC100136955 | LOC100136955 | coding | upstream | 376486 | 82788554 ~ 82799768 (+) |
| LOC110538657 | NA | coding | upstream | 392360 | 82781358 ~ 82783884 (+) |
| LOC110538665 | LOC106600671 | coding | downstream | 207378 | 83384122 ~ 83390118 (+) |
| LOC110538666 | LOC106601613 | coding | downstream | 220112 | 83396856 ~ 83399815 (+) |
| LOC110538667 | LOC106601614 | coding | downstream | 225534 | 83402278 ~ 83405039 (+) |
| LOC110538669 | LOC106606512 | coding | downstream | 235072 | 83411816 ~ 83416515 (+) |
| LOC110538670 | LOC106606839 | coding | downstream | 241149 | 83417893 ~ 83440915 (+) |
| G1119152 | NA | non-coding | upstream | 7342 | 83168624 ~ 83168902 (+) |
| G1119151 | NA | non-coding | upstream | 10680 | 83164668 ~ 83165564 (+) |
| G1119138 | NA | non-coding | upstream | 37140 | 83137920 ~ 83139104 (+) |
| G1119048 | NA | non-coding | upstream | 170093 | 83005918 ~ 83006151 (+) |
| G1119030 | NA | non-coding | upstream | 198368 | 82977498 ~ 82977876 (+) |
| G1119170 | NA | non-coding | downstream | 15544 | 83192288 ~ 83193620 (+) |
| G1119249 | NA | non-coding | downstream | 143935 | 83320679 ~ 83321285 (+) |
| G1119316 | NA | non-coding | downstream | 270533 | 83447277 ~ 83480307 (+) |
| LOC110538674 | LOC106606841 | non-coding | downstream | 297299 | 83470729 ~ 83476381 (+) |
| G1119331 | NA | non-coding | downstream | 303859 | 83480603 ~ 83480858 (+) |
| G1118965 | NA | other | upstream | 289280 | 82885987 ~ 82886964 (+) |
| LOC110538650 | ndua4 | other | upstream | 802607 | 82345174 ~ 82373637 (+) |
| LOC100335037 | LOC106606889 | other | upstream | 1195956 | 81977678 ~ 81980288 (+) |
| G1118488 | NA | other | upstream | 1279954 | 81895490 ~ 81896290 (+) |
| LOC110538671 | LOC105013089 | other | downstream | 264904 | 83441564 ~ 83450114 (+) |
| LOC110539179 | LOC106606845 | other | downstream | 574256 | 83744298 ~ 83756511 (+) |
| LOC110538685 | LOC106606823 | other | downstream | 948609 | 84125310 ~ 84145340 (+) |
| G1120926 | NA | other | downstream | 1048073 | 84224817 ~ 84226281 (+) |
| G1120984 | NA | other | downstream | 1361721 | 84538465 ~ 84791130 (+) |
