Gene
RNA
| Item | Value |
|---|---|
| gene id | G1123273 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 87177532 ~ 87179266 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1277270 | True | 1735 | lncRNA | 0.35 | 1 | 87177532 | 87179266 |
87,174,400
87,174,800
87,175,200
87,175,600
87,176,000
87,176,400
87,176,800
87,177,200
87,177,600
87,178,000
87,178,400
87,178,800
87,179,200
87,179,600
87,180,000
87,180,400
87,180,800
87,181,200
87,181,600
87,182,000
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| srebf1 | srebf1 | coding | upstream | 30019 | 87113193 ~ 87147513 (+) |
| LOC110538041 | tom1l2 | coding | upstream | 67271 | 87069375 ~ 87110261 (+) |
| LOC110486873 | LOC106601810 | coding | upstream | 155558 | 86988813 ~ 87021974 (+) |
| LOC118936240 | LOC106601814 | coding | upstream | 197470 | 86974548 ~ 86980062 (+) |
| LOC110486866 | LOC106601809 | coding | upstream | 216385 | 86929076 ~ 86961147 (+) |
| LOC118937769 | LOC106601794 | coding | downstream | 5550 | 87184816 ~ 87196294 (+) |
| LOC118937770 | LOC106601793 | coding | downstream | 30020 | 87209286 ~ 87223693 (+) |
| LOC110538913 | LOC106606529 | coding | downstream | 122240 | 87301506 ~ 87310761 (+) |
| LOC118936253 | LOC106606557 | coding | downstream | 164723 | 87343989 ~ 87346540 (+) |
| LOC110537852 | LOC106568321 | coding | downstream | 168105 | 87347371 ~ 87374726 (+) |
| G1123294 | NA | non-coding | upstream | 21749 | 87153715 ~ 87155783 (+) |
| G1123287 | NA | non-coding | upstream | 56869 | 87119778 ~ 87120663 (+) |
| G1123238 | NA | non-coding | upstream | 125344 | 87048892 ~ 87052188 (+) |
| G1123137 | rs2 | non-coding | upstream | 193832 | 86932135 ~ 86983700 (+) |
| G1123149 | NA | non-coding | upstream | 249107 | 86927732 ~ 86928425 (+) |
| G1123270 | NA | non-coding | downstream | 1135 | 87180401 ~ 87181118 (+) |
| G1123297 | LOC106606576 | non-coding | downstream | 3402 | 87182668 ~ 87183055 (+) |
| G1123308 | LOC106606586 | non-coding | downstream | 50236 | 87229502 ~ 87231150 (+) |
| G1123319 | NA | non-coding | downstream | 76292 | 87255558 ~ 87255842 (+) |
| G1122918 | NA | other | upstream | 555532 | 86618576 ~ 86622000 (+) |
| LOC110539018 | LOC106606751 | other | upstream | 955331 | 86171212 ~ 86222216 (+) |
| G1122554 | NA | other | upstream | 1098422 | 86073322 ~ 86079110 (+) |
| G1122549 | NA | other | upstream | 1119408 | 86057752 ~ 86058124 (+) |
| G1123336 | LOC106606528 | other | downstream | 116263 | 87295529 ~ 87295995 (+) |
| LOC110511683 | fa10 | other | downstream | 609126 | 87788171 ~ 87796289 (+) |
| LOC110538559 | LOC106601860 | other | downstream | 744191 | 87923360 ~ 87945405 (+) |
| LOC110512269 | LOC106606494 | other | downstream | 1816817 | 88996013 ~ 89073080 (+) |
| LOC110487000 | LOC106606498 | other | downstream | 2201982 | 89374398 ~ 89387087 (+) |
