G1128567 (LOC106606382)


Basic Information

Item Value
gene id G1128567
gene name LOC106606382
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 93574065 ~ 93577988 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1283813
ACTGGGTGTCAATGGGAATGTTGTTCTCCAGAACATAGATTGGATCCTCAGACTTCATGTATGCTGCTACTCCTTTGGCAGCTTTGATGATGACATAGGGAACTCTGTCTCCCAGTTGGGGGGCGCTACCCGCGTCTCTCTTCTTCATCcTCTCAGCCAGCTCCACATGCGCCTGCTTGGCAGCGTACTCCTGGGCTGTGCGGGTCAGCTCCTTGGTGATAACCAGCTGGCTGATGTCGATGCGGTTACACAGCAGGTCAGAGATCACCTCTTTGGCGTGGGCCACCGCACCCTGGGGATCTCTGTCTATCAGAATGGTCTGCAGGCAGGTGTTGATCAGATTGGCCACCAGGGTACAGTTGTCCCTGCGGACCGTCTCGATACCCTTGCAGTCCATCTTGTCGTGAGTGTCGGCGCTGGAGGAGAAGTAGAGGCCTGCGTAGCGCTTCTTGTTGATCAACAGGTAGGGGTAGTACAcCTTCTCAAACTCCAGTTTGATGGGAGGGGTGAAGTGGGAGGAGACCCACTCTGCCGCCTCCCTCCCAACCTCCATGGCCCTGCTCACAGTGTCCACG
>TU1283814
CGGACCCGTCTATCAGAATGTTCTAGATGGTACCTACCCGTCTATCAGAATGTTCTAGATGGTACCTACCCGTCTATCAGAATGTTCTAGATGGTACCTACCTGTCTATCAGAATGGTCTGCAGGCAGGTGTTGATCAGATTGGCCACCAGGGTACAGTTGTCCCTGCGGACCGTCTCGATACCCTTGCAGTCCATCTTGTCGTGAGTGTCGGCGCTGGAGGAGAAGTAGAGGCCTGCGTAGCGCTTCTTGTTGATCAACAGGTAGGGGTAGTACAcCTTCTCAAACTCCAGTTTGATGGGAGGGGTGAAGTGGGAGGAGACCCACTCTGCCGCCTCCCTCCCAACCTCCATGGCCCTGCTCACAGTGTCCACG

Function

NR:

description
DNA polymerase delta catalytic subunit-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1283813 False 575 TUCP 0.56 5 93574065 93577988
TU1283814 True 374 TUCP 0.54 2 93574065 93574891

Neighbor

gene id symbol gene type direction distance location
LOC110487423 gys1 coding downstream 32863 93513854 ~ 93541202 (-)
LOC118937787 LOC106606413 coding downstream 72599 93497315 ~ 93501466 (-)
LOC110487430 LOC106601877 coding downstream 85533 93473123 ~ 93488532 (-)
LOC110487457 LOC106606216 coding downstream 181797 93381051 ~ 93392268 (-)
LOC110487442 trub1 coding downstream 207205 93365401 ~ 93366860 (-)
LOC110487463 LOC106606238 coding upstream 49538 93627526 ~ 93660689 (-)
LOC110487422 LOC106606377 coding upstream 90294 93668282 ~ 93683137 (-)
p-ras LOC101485266 coding upstream 137175 93715163 ~ 93725341 (-)
LOC118937784 LOC105029052 coding upstream 151031 93729019 ~ 93795410 (-)
LOC118937783 LOC105029051 coding upstream 225080 93803068 ~ 93839627 (-)
G1128566 NA non-coding downstream 243 93573212 ~ 93573822 (-)
G1128554 NA non-coding downstream 31857 93541964 ~ 93542208 (-)
G1128515 NA non-coding downstream 109727 93405426 ~ 93464338 (-)
G1128533 NA non-coding downstream 111758 93413803 ~ 93462307 (-)
G1128519 NA non-coding downstream 127603 93415935 ~ 93446462 (-)
G1128571 NA non-coding upstream 1537 93579525 ~ 93579725 (-)
G1128572 NA non-coding upstream 5985 93583973 ~ 93585036 (-)
G1128575 NA non-coding upstream 9823 93587811 ~ 93588112 (-)
G1128579 NA non-coding upstream 25980 93603968 ~ 93604311 (-)
G1128581 NA non-coding upstream 29476 93607464 ~ 93607762 (-)
G1127792 NA other downstream 719957 92850300 ~ 92854108 (-)
G1127739 NA other downstream 818933 92754879 ~ 92755132 (-)
G1127735 NA other downstream 825850 92747794 ~ 92748215 (-)
G1127726 NA other downstream 855598 92715049 ~ 92718467 (-)
G1128609 NA other upstream 111697 93689685 ~ 93690320 (-)
G1128616 NA other upstream 125007 93702995 ~ 93707636 (-)
G1128731 LOC106595797 other upstream 428590 94006578 ~ 94116184 (-)
LOC110487111 LOC106606373 other upstream 602020 94179962 ~ 94190977 (-)

Expression


Co-expression Network