Gene
RNA
| Item | Value |
|---|---|
| gene id | G1128585 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 93615986 ~ 93616924 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: SH3 domain-containing protein C23A1.17-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1283833 | True | 939 | lncRNA | 0.39 | 1 | 93615986 | 93616924 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487423 | gys1 | coding | downstream | 74784 | 93513854 ~ 93541202 (-) |
| LOC118937787 | LOC106606413 | coding | downstream | 114520 | 93497315 ~ 93501466 (-) |
| LOC110487430 | LOC106601877 | coding | downstream | 127454 | 93473123 ~ 93488532 (-) |
| LOC110487457 | LOC106606216 | coding | downstream | 223718 | 93381051 ~ 93392268 (-) |
| LOC110487442 | trub1 | coding | downstream | 249126 | 93365401 ~ 93366860 (-) |
| LOC110487463 | LOC106606238 | coding | upstream | 10602 | 93627526 ~ 93660689 (-) |
| LOC110487422 | LOC106606377 | coding | upstream | 51358 | 93668282 ~ 93683137 (-) |
| p-ras | LOC101485266 | coding | upstream | 98239 | 93715163 ~ 93725341 (-) |
| LOC118937784 | LOC105029052 | coding | upstream | 112095 | 93729019 ~ 93795410 (-) |
| LOC118937783 | LOC105029051 | coding | upstream | 186144 | 93803068 ~ 93839627 (-) |
| G1128581 | NA | non-coding | downstream | 8224 | 93607464 ~ 93607762 (-) |
| G1128579 | NA | non-coding | downstream | 11675 | 93603968 ~ 93604311 (-) |
| G1128575 | NA | non-coding | downstream | 27874 | 93587811 ~ 93588112 (-) |
| G1128572 | NA | non-coding | downstream | 30950 | 93583973 ~ 93585036 (-) |
| G1128571 | NA | non-coding | downstream | 36261 | 93579525 ~ 93579725 (-) |
| G1128597 | NA | non-coding | upstream | 28079 | 93645003 ~ 93652249 (-) |
| G1128621 | NA | non-coding | upstream | 95915 | 93712839 ~ 93714438 (-) |
| G1128622 | NA | non-coding | upstream | 110514 | 93727438 ~ 93727786 (-) |
| G1128624 | NA | non-coding | upstream | 119212 | 93736136 ~ 93737916 (-) |
| G1128640 | NA | non-coding | upstream | 182840 | 93799764 ~ 93800180 (-) |
| G1128567 | LOC106606382 | other | downstream | 37998 | 93574065 ~ 93577988 (-) |
| G1127792 | NA | other | downstream | 761878 | 92850300 ~ 92854108 (-) |
| G1127739 | NA | other | downstream | 860854 | 92754879 ~ 92755132 (-) |
| G1127735 | NA | other | downstream | 867771 | 92747794 ~ 92748215 (-) |
| G1128609 | NA | other | upstream | 72761 | 93689685 ~ 93690320 (-) |
| G1128616 | NA | other | upstream | 86071 | 93702995 ~ 93707636 (-) |
| G1128731 | LOC106595797 | other | upstream | 389654 | 94006578 ~ 94116184 (-) |
| LOC110487111 | LOC106606373 | other | upstream | 563084 | 94179962 ~ 94190977 (-) |
