G1128597


Basic Information

Item Value
gene id G1128597
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 93645003 ~ 93652249 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1283845
GATTCGGGGCTGACGCAAACTTATTCGGGGCTAAAGCCCCGAAAGCCAGGTCCTGGTGATGTCCATGCTACAGCAATAGACATTTGTTGTCCAAACAGTTTCTCCGCgattgtatttttaaatgttgCGATATGCCTGGCTGGCTctctgcttttcactgacagtcgcAACTCGACAATAATTGATTTGTCATTTGCAGCACGGTTGAAGGCTATGCGATTTAAAACAATCCACAGCTTTAAAAACAGaaagaagctaatgatcctctgtggccaaatcatgctttcTGGTGTAGTAGTTCATTTAGAATGATTTCATAAATATATCGACACGAGTAAGCTAATTAGCTATATCATTTTGGCAATTTATTTAAATGTACTTTAGGAAAATCTCAGCTTAACCTTATGGACATGCCGCCTCTGTCTTTTAATGTTTCATAAACAATCACTTAACGAAGACGCTCTTCTTGTAGGCTAACCGCGCACATTCATCCACTCACAAAATAATTTCAGCATCCAAACCccaacagtgcactgtgcacctaCAATTTGATGAATTGAAATCGACATTCATTATTATACATTCATTTATTACAACCAGTTActgtgttattttttttttaggtaGCCTACCGGAGCACCGTTGTTTTTAAATTAGTATTAAGACATCATTTCTGAATTAAAGTTGATAACAAAAGTCTTCATGTTGGATGAAATAATGTTAGAATGTAGGCTAAATACAACGCATCATCCAAATGTCACGATCGCTTACACATACTGTAAGTGGctaaaataaaattatattttttaaattttaaaacACCAAATTAGGCCTACTTTATATTCGGTTTGTTGTGTATTTTTTAATTAATTACATGGCGTTTTTGGCATAACAGTAGCCCGACATTATCATGCTGTTATATTCGGTTTGTTGTGTAGATTACAAATTAATCATGAAGTGATCTGGCGAGACATGGCACCATTCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1283845 True 987 lncRNA 0.36 2 93645003 93652249

Neighbor

gene id symbol gene type direction distance location
LOC110487423 gys1 coding downstream 103801 93513854 ~ 93541202 (-)
LOC118937787 LOC106606413 coding downstream 143537 93497315 ~ 93501466 (-)
LOC110487430 LOC106601877 coding downstream 156471 93473123 ~ 93488532 (-)
LOC110487457 LOC106606216 coding downstream 252735 93381051 ~ 93392268 (-)
LOC110487442 trub1 coding downstream 278143 93365401 ~ 93366860 (-)
LOC110487422 LOC106606377 coding upstream 16033 93668282 ~ 93683137 (-)
p-ras LOC101485266 coding upstream 62914 93715163 ~ 93725341 (-)
LOC118937784 LOC105029052 coding upstream 76770 93729019 ~ 93795410 (-)
LOC118937783 LOC105029051 coding upstream 150819 93803068 ~ 93839627 (-)
LOC110514005 LOC106601187 coding upstream 292389 93944638 ~ 93973143 (-)
G1128585 NA non-coding downstream 28079 93615986 ~ 93616924 (-)
G1128581 NA non-coding downstream 37241 93607464 ~ 93607762 (-)
G1128579 NA non-coding downstream 40692 93603968 ~ 93604311 (-)
G1128575 NA non-coding downstream 56891 93587811 ~ 93588112 (-)
G1128572 NA non-coding downstream 59967 93583973 ~ 93585036 (-)
G1128621 NA non-coding upstream 60590 93712839 ~ 93714438 (-)
G1128622 NA non-coding upstream 75189 93727438 ~ 93727786 (-)
G1128624 NA non-coding upstream 83887 93736136 ~ 93737916 (-)
G1128640 NA non-coding upstream 147515 93799764 ~ 93800180 (-)
G1128649 NA non-coding upstream 169523 93821772 ~ 93822495 (-)
G1128567 LOC106606382 other downstream 67015 93574065 ~ 93577988 (-)
G1127792 NA other downstream 790895 92850300 ~ 92854108 (-)
G1127739 NA other downstream 889871 92754879 ~ 92755132 (-)
G1127735 NA other downstream 896788 92747794 ~ 92748215 (-)
G1128609 NA other upstream 37436 93689685 ~ 93690320 (-)
G1128616 NA other upstream 50746 93702995 ~ 93707636 (-)
G1128731 LOC106595797 other upstream 354329 94006578 ~ 94116184 (-)
LOC110487111 LOC106606373 other upstream 527759 94179962 ~ 94190977 (-)

Expression


Co-expression Network