G1128621


Basic Information

Item Value
gene id G1128621
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 93712839 ~ 93714438 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1283874
tttAGGCGTACCTATAGAAAAACAAATATACAACTCTAAATTTGATCATTTAAAAATTATACCCTTTTTAATAATTTTCAACCGGTTATATGGTGTTCACTTCTAACCCTATTTATGTTGAGGTCGCAGGCATAGGGTCTTCTTCAGCCAACAGTGTTTCTGACGTtctgaaaggagagagggaaccaGATGTCACTTTAAACTTGGGGAACATGTGCACACTTCGGGAGAAAGGAAATATTATTGTGACTAACCCGTAAATCATCAAAGTTCTTTTCAAGGGAGAAACTTACAGCCAGAGTGTCATACTCAGGAGACATTGTCCTTTTATTCAGAGTCATGTATGTGTCATCAGACTGCGCCTTGTGTGTCGGTTTACCACAAGGTACCATCTGTGCCTCCCCGATAAAGTTCATTCCTCTTGGGGCTTTCCTGGAGAGAGTGACAGATGACATGTAGGAGTCCCAGGTCAACAGGCCATAACGCTGTAATGTAGTAGTCTCAGGACAACAGGCCATAATGCTGTAGTCTCAGGACAACAGACCATAACACTAGAGTAAAggtcatgtagtagtctcagGACAACAGGCCATAATGCTGTAGTCTCAGGACAACAGACCATAACACTGTAGAGTAAAggtcatgtagtagtctcagGACAACAGACCATAACACTGTAGAGTAAAggtcatgtagtagtctcagGACAACAGGCCATAACACTGTAGAGTAAAggtcatgtagtagtctcagGACAACAGACCATAACACTGTAGAGTAAAggtcatgtagtagtctcagGACAACAGACCATAACACTGTAGAGTAAAggtcatgtagtagtctcagGACAACAGGCCATAACACTGTAGAGTAAAggtcatgtagtagtctcagGACAACAGACCATAACACTGTAGAGTAAAggtcatgtagtagtctcagGACAACAGACCATAACACTGTAGAGTAAAggtcatgtagtagtctcagGACAACAGGCCATAACACTGTAGAGTAAAggtcatgtagtagtctcagGACAACAGACCATAACACTGTAGAGTAAAggtcatgtagtagtctcagGACAACAGACCATAACACTGTAGAGTAAAggtcatgtagtagtctcagGACAACAGGCCATAACACTGTAGAGTAAAggtcatgtagtagtctcagGACAACAGACCATAACACTAGAGTAAAggtcatgtagtagtctcagGACAACAGACCATAACACTAGAGTAAAggtcatgtagtagtctcagGACAACAGACCATAACACTAGAGTAAAggtcatgtagtagtctcagGACAACAGACCATAACACTGTAGAGTAAAGACACACTTATTTTTTTATATGCCATAATTTCTTAACTGGATTCTAAATACTTTGCCT

Function

NR:

description
hemicentin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1283874 True 1410 lncRNA 0.41 2 93712839 93714438

Neighbor

gene id symbol gene type direction distance location
LOC110487422 LOC106606377 coding downstream 29702 93668282 ~ 93683137 (-)
LOC110487463 LOC106606238 coding downstream 52150 93627526 ~ 93660689 (-)
LOC110487423 gys1 coding downstream 171637 93513854 ~ 93541202 (-)
LOC118937787 LOC106606413 coding downstream 211373 93497315 ~ 93501466 (-)
LOC110487430 LOC106601877 coding downstream 224307 93473123 ~ 93488532 (-)
p-ras LOC101485266 coding upstream 725 93715163 ~ 93725341 (-)
LOC118937784 LOC105029052 coding upstream 14581 93729019 ~ 93795410 (-)
LOC118937783 LOC105029051 coding upstream 88630 93803068 ~ 93839627 (-)
LOC110514005 LOC106601187 coding upstream 230200 93944638 ~ 93973143 (-)
LOC110507112 LOC106596372 coding upstream 420691 94135129 ~ 94138662 (-)
G1128597 NA non-coding downstream 60590 93645003 ~ 93652249 (-)
G1128585 NA non-coding downstream 95915 93615986 ~ 93616924 (-)
G1128581 NA non-coding downstream 105077 93607464 ~ 93607762 (-)
G1128579 NA non-coding downstream 108528 93603968 ~ 93604311 (-)
G1128575 NA non-coding downstream 124727 93587811 ~ 93588112 (-)
G1128622 NA non-coding upstream 13000 93727438 ~ 93727786 (-)
G1128624 NA non-coding upstream 21698 93736136 ~ 93737916 (-)
G1128640 NA non-coding upstream 85326 93799764 ~ 93800180 (-)
G1128649 NA non-coding upstream 107334 93821772 ~ 93822495 (-)
G1128655 NA non-coding upstream 119614 93834052 ~ 93835086 (-)
G1128616 NA other downstream 5203 93702995 ~ 93707636 (-)
G1128609 NA other downstream 22519 93689685 ~ 93690320 (-)
G1128567 LOC106606382 other downstream 134851 93574065 ~ 93577988 (-)
LOC110487457 LOC106606216 other downstream 320662 93381051 ~ 93392268 (-)
G1127792 NA other downstream 858731 92850300 ~ 92854108 (-)
G1128731 LOC106595797 other upstream 292140 94006578 ~ 94116184 (-)
LOC110487111 LOC106606373 other upstream 465570 94179962 ~ 94190977 (-)
G1128814 NA other upstream 536563 94251001 ~ 94252388 (-)
G1128822 LOC106606284 other upstream 560124 94274562 ~ 94275182 (-)

Expression


Co-expression Network