G1128296


Basic Information

Item Value
gene id G1128296
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 93799585 ~ 93802782 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1283447
TTAAATCATTCCATTTGTTATTTCATTACAGTTACTAATAAGGCCTAAGTTACGCTGTGTTGCCATGATGATGTTTGTGGAGGATTCTGTTCTCTCTGCAGTCTCCGTTGCAGCTACTAGCTTTGCTTTGATGGTTATAGCTGTGCAGAGCACTCAGAAATCCCAGTTTATATCTAATGACATGAATGGGCAGAGCTGGGTGGTAAACTCACCaggcaggatcaatgagttagccagggTAAACTCAACACTGAGAAATACAGTAACAGTTGACCTGGATAAACTCAACACTGAGAAATACAGTAACAGTTGACCTGGGTAAACTCAACACTGAGAAATACAGTAACAGTTGACCTGGATAAACTCAACACTGAGAAATACAGTAACAGTTGATTGTCTTGATCAAGGGTGCATAACCTCAGGCCCTCGACATCCACAGTCCTGCTAGGTTAGTGTTTCTCCCTGGTACTTATGATCAACTAATGATTGGCTGACGTGTGCACACACCTCGTTTCCCAGCGACAAATCAATCACTGGTAACAAGGCAAGGATGAAAAAACAGTTATTTTCACACTACGGAGTCGatctgagccaagctgaactgGCCTGCAAAGGACAAGGTAGTAAGAATGGTTAGATGGTTAGGATCAGAACGACAGTGTAAATGAGTAGAACCAGAACAGTATGGTTAGGATCAGAACGGCAGTGTGACTAGGTTAAAGGACTAGTCTGCTTTGAGGACTGAGACTTTGCACCATGGTCTCAAGATCATAAGGGAGGTAAAGTTGCAGCTCATTGAAAGTAAGAGTCAAACATACATATACACTATGTACAAAATATATGATTAGATACTTAGCTCACTGGCTCTGCCCGGTGACCTGCCCCCTGATGGGGCCTCTCTAGCTCACTGGCTCTGCCCGGTGACCTGCCCCCTGATGGGGCCTCTCTAGCTCACTGGCTCTGCCCGGTGACCTGCCCCCTGATGGGGCCTCTCTAGCTCACTGGCTCTGCCCGGTAACCTGCCCCCTGATGGGGCCTCTCTAGCTCACTGGCTCTGCCCGGTGACCTGCCCCCTGATGGGGCCTCTCTAGCTCACTGGCTCTGCCCGGTAACCTGCCCCCTGATGGGGCCTCTCTAGCTCACTGGCTCTGCCCGGTGACCTGCCCCCTGATGGGGCCTCTCTAGCTCACTGGCTCTGCCCGGTAACCTGCCCCCTGATGGGGCCTCTCTAGCTCACTGGCTCTGCCCGGTAACCTGCCCCCTGATGGGGCCTCCCTAGCTCACTGGCTCTGCCCGGTAACCTGCCCCCTGATGGGGCCTCTCTAGCTCACTGGTTCTGCCCGGTGACCTGCCCCCTGATGGGGCCTCCCTAGCTCACTGGTTCTGCCTGGTGACCAGCCCCCTGGTGGGGCCTCCCTAGCTCACTGGTTCTGCCTGGTGACCTGCCCCCTGATGGGGCCTCCCTAGCTCACTGGTTCTGCCCGGTAACCTGCCCCCTGATGGGGCCTCCCTAGCTCACTGGCTCTGCCCGGTAACCTGCCCCCTGATGGGGCCTCTCTAGCTCACTGGTTCTGCCCGGTGACCTGCCCCCTGATGCCTCCCTAGCTCACTGGTTCTGCCTGGTGACCAGCCCCCTGGTGGGGCCTCCCTAGCTCACTGGTTCTGCCTGGTGACCTGCCCCCTGGTGGggcctctgacagacagacagacacgttggGTCAGAGGCAACAATAGGCATCAGGAGATGATGTGAATGTTAAGTTCCCTTTCAGTCCGTTCACTACTATTAacactactaacacacagctatgTGGATTGTACTGTTCCTCAATACCATCACATACTACAGGCCAGTAAAACCCCAGACACAAGGCATGTTATTTTCTAAACATCTTTTAGAAGTTACTTTTGCAGGATCTTTGTTTATGGGCGGTTACTGGTCATACCGAGTACCACTGCACAACTTTCCCAATCTTTGCCCCAAATTCAGCTCCTTACTTTCTTGAACTAAGTTTAGCACCCTAATAAAAAAAACTGCATATCAGAatatatcaaatatatattttgtggCTCTCTGGATCAGAGCCTCTACTTGTCTTACAAGAGTATTACTATGCAATATACAAGCTGGACTTTAAAGTCCTTCGCTTCCCTCAATACTCCTCACCTTCAGAAGTGTCTTTGGAGCAGAATCAAGTCAAACTACAAGAAACCCAAGAATACAAGTCATACTTATAATTGACCTGTGAGCAGCTAGTTGAAACTGTCATCACAGTTCAAGGAACAGGATCCTGGGTGTGTTAATACAGCACTTGAACCATAAGGCACTTCCTACAGTACTTATCAGTATAATGATAGGTCACCTATAATAAGGCACTTCCTACAGTACTTATCAGTATAATGATAGGTAACCTATAATAAGGCACTCCTTACAGTACTTATCAGTATAATGATAGGTCACCTATAATAAGGCACTTCCTACAGTACTTATCAGTATAATGATAGGTCACCTATAATAAGGCACTTCCTACAGTACTTATCAGTATAATGATAGGTCACCTATAATAAGGCACTTCCTACAGTACTTATCAGTATAATGATAGGTCACCTATAATAAGGCACTTCCTACAGTACTTATCAGTATAATGATAGGTCACCTATAATAAGGCACTTCTTACAGTACTTATCAGTATAATGATAGGTCACCTATAATAAGGCACTTCGAACAGTACTTATCAGTATAATGATAGGTCACCTATAATAAGGCACTTCCTACAGTACTTATCAGTATAATGATAGGTCACCTATAATAAGGCACTTCCTACAGTACTTATCAGTATAATGATAGGTCACCTATAATAAGGCACTTCCTACAGTACTTATCAGTATAATGATAGGTCACCTATAATAAGGCACTTCCTACAGTACTTATCAGTATAATGATAGGTCACCTATAATAAGGCACTTCCTACAGTACTTATCAGTATAATGATAGGTCACCTATAATAAGGCACTTCCTACAGTACTTATCAGTATAATGATAGGTCACCTATAATAAGGCACTTCCTACAGTACTTATCAGTATAATGATAGGTCACCTATAATAAGGCACTTCGAACAGTACTTATCAGTATAATGATAGGTCACCTATAATAAGGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1283447 True 3161 lncRNA 0.46 2 93799585 93802782

Neighbor

gene id symbol gene type direction distance location
LOC110485283 LOC106606237 coding upstream 83495 93708982 ~ 93717463 (+)
LOC110534257 dpod1 coding upstream 197446 93544837 ~ 93602139 (+)
aspdh LOC106606414 coding upstream 286367 93503292 ~ 93513218 (+)
LOC110487438 LOC106606384 coding upstream 302570 93490576 ~ 93497015 (+)
LOC110487416 LOC106606345 coding upstream 326997 93433224 ~ 93472588 (+)
LOC118937785 LOC106601943 coding downstream 33233 93836015 ~ 93867992 (+)
LOC118937789 NA coding downstream 104253 93907035 ~ 93922982 (+)
LOC110514006 LOC106603827 coding downstream 120529 93923311 ~ 93934388 (+)
LOC118937788 NA coding downstream 176896 93979678 ~ 93990780 (+)
LOC110516968 LOC106593326 coding downstream 188827 93991609 ~ 93995341 (+)
G1128290 NA non-coding upstream 33758 93765304 ~ 93765827 (+)
G1128273 LOC106606378 non-coding upstream 41374 93729017 ~ 93758211 (+)
G1128280 NA non-coding upstream 53740 93744700 ~ 93745845 (+)
G1128278 LOC106606378 non-coding upstream 57043 93738529 ~ 93742542 (+)
G1128270 NA non-coding upstream 79761 93719478 ~ 93719824 (+)
G1128304 NA non-coding downstream 18874 93821656 ~ 93822511 (+)
G1128310 NA non-coding downstream 31345 93834127 ~ 93835483 (+)
G1128355 NA non-coding downstream 96893 93899675 ~ 93900776 (+)
G1128357 NA non-coding downstream 102604 93905386 ~ 93905984 (+)
G1128360 NA non-coding downstream 113740 93916522 ~ 93921448 (+)
G1128189 NA other upstream 342625 93455845 ~ 93456960 (+)
G1128105 NA other upstream 527325 93271888 ~ 93272260 (+)
LOC110514489 LOC106606301 other upstream 907992 92877528 ~ 92940625 (+)
G1127628 NA other upstream 1137520 92651458 ~ 92662065 (+)
G1128318 NA other downstream 39987 93842769 ~ 93843097 (+)
LOC110485300 LOC106581592 other downstream 262905 94065500 ~ 94116043 (+)
G1129047 NA other downstream 934987 94737769 ~ 94833934 (+)
G1129576 NA other downstream 1391604 95194386 ~ 95195280 (+)
LOC110516622 LOC105012861 other downstream 1409522 94934381 ~ 95232039 (+)

Expression


Co-expression Network