G1128310


Basic Information

Item Value
gene id G1128310
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 93834127 ~ 93835483 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1283462
ATGGGGCTTAATGTACAGGTTCTGATAGTGAGTGGGTGTCAATAGACTATAAACATGGGGCTTAATGTACAGGTTCTGATAGTGAGTGGGTGTCAATAGTCTATAAACATGGGGCTTAATGTACAGGTTCTGATAGTGAGTGGGTGTCAATAGACTATAAACATGGGGCTTAATGTACAGGTTCTGATAGTGAGTGGGTGTCAATAGACTATAAACATGGGGCTTAATGTACAGGTTCTGATAGTGAGTGGGTGTCAATAGTCTATAAACAAAGGTTGTTTCCCCACAGACTCTGTTATTTGTCTGGTACTTGTTTTTCACAGCTGGGGACTCGACGGGATTCAGTCCATCCATTTTATGTTACAGTATTAAATAGAAGCTGTTACAGTATCAAATAGAAGCTGTTACAGTATTAAATAGAAGCTGTTACAGTATCAAATAGAAGCTGTTACAGTATCAAATAGAAGCTGTTACAGTATCAAATAGAAGCTGTTACAATATCAAATAGAAGCTGTTACAGTATCAAATAGAAGCTGTTACAGTATCAAATAGAAGCTGTTACAATATCAAATAGAAGCTGTTAGAGTATCAAATAGAAGCTGTTACAATATCAAATAGAAGCTGTTAGAGTATCAAATAGAAGCTGTTACAGTATCAAATAGAAGCTGTTA
>TU1283463
ATGGGGCTTAATGTACAGGTTCTGATAGTGAGTGGGTGTCAATAGACTATAAACATGGGGCTTAATGTACAGGTTCTGATAGTGAGTGGGTGTCAATAGTCTATAAACATGGGGCTTAATGTACAGGTTCTGATAGTGAGTGGGTGTCAATAGACTATAAACATGGGGCTTAATGTACAGGTTCTGATAGTGAGTGGGTGTCAATAGACTATAAACATGGGGCTTAATGTACAGGTTCTGATAGTGAGTGGGTGTCAATAGTCTATAAACAAAGGTTGTTTCCCCACAGACTCTGTTATTTGTCTGGTACTTGTTTTTCACAGCTGGGGACTCGACGGGATTCAGTCCATCCATTTTATGTTACAGTATTAAATAGAAGCTGTTACAGTATCAAATAGAAGCTGTTACAGTATTAAATAGAAGCTGTTACAGTATCAAATAGAAGCTGTTACAGTATCAAATAGAAGCTGTTACAGTATCAAATAGAAGCTGTTACAATATCAAATAGAAGCTGTTACAGTATCAAATAGAAGCTGTTACAGTATCAAATAGAAGCTGTTACAATATCAAATAGAAGCTGTTAGAGTATCAAATAGAAGCTGTTACAATATCAAATAGAAGCTGTTAGAGTATCAAATAGAAGCTGTTACAGTATCAAATAGAAGCTGTTA

Function

NR:

description
PREDICTED: adhesion G protein-coupled receptor E3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1283462 False 671 lncRNA 0.36 5 93834127 93835483
TU1283463 True 671 lncRNA 0.36 4 93834127 93835483

Neighbor

gene id symbol gene type direction distance location
LOC110485283 LOC106606237 coding upstream 118037 93708982 ~ 93717463 (+)
LOC110534257 dpod1 coding upstream 231988 93544837 ~ 93602139 (+)
aspdh LOC106606414 coding upstream 320909 93503292 ~ 93513218 (+)
LOC110487438 LOC106606384 coding upstream 337112 93490576 ~ 93497015 (+)
LOC110487416 LOC106606345 coding upstream 361539 93433224 ~ 93472588 (+)
LOC118937785 LOC106601943 coding downstream 532 93836015 ~ 93867992 (+)
LOC118937789 NA coding downstream 71552 93907035 ~ 93922982 (+)
LOC110514006 LOC106603827 coding downstream 87828 93923311 ~ 93934388 (+)
LOC118937788 NA coding downstream 144195 93979678 ~ 93990780 (+)
LOC110516968 LOC106593326 coding downstream 156126 93991609 ~ 93995341 (+)
G1128304 NA non-coding upstream 11616 93821656 ~ 93822511 (+)
G1128296 NA non-coding upstream 31345 93799585 ~ 93802782 (+)
G1128290 NA non-coding upstream 68300 93765304 ~ 93765827 (+)
G1128273 LOC106606378 non-coding upstream 75916 93729017 ~ 93758211 (+)
G1128355 NA non-coding downstream 64192 93899675 ~ 93900776 (+)
G1128357 NA non-coding downstream 69903 93905386 ~ 93905984 (+)
G1128360 NA non-coding downstream 81039 93916522 ~ 93921448 (+)
G1128407 NA non-coding downstream 269580 94105063 ~ 94107845 (+)
G1128329 NA non-coding downstream 286252 94121735 ~ 94122212 (+)
G1128189 NA other upstream 377167 93455845 ~ 93456960 (+)
G1128105 NA other upstream 561867 93271888 ~ 93272260 (+)
LOC110514489 LOC106606301 other upstream 942534 92877528 ~ 92940625 (+)
G1127628 NA other upstream 1172062 92651458 ~ 92662065 (+)
G1128318 NA other downstream 7286 93842769 ~ 93843097 (+)
LOC110485300 LOC106581592 other downstream 230204 94065500 ~ 94116043 (+)
G1129047 NA other downstream 902286 94737769 ~ 94833934 (+)
G1129576 NA other downstream 1358903 95194386 ~ 95195280 (+)
LOC110516622 LOC105012861 other downstream 1376821 94934381 ~ 95232039 (+)

Expression


Co-expression Network