G1128407


Basic Information

Item Value
gene id G1128407
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 94105063 ~ 94107845 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1283588
GTTGTCAGCGGCCGGTGTTTGTGCTTCAAAACGCTCAGTGGCTATCGAGGCTTGCCAGTCACCACAGCGTCCACGTGTGGCAACCTCTTCAGTGCCTGCGAACTGAGATAAGGTTTTCTGTCTGTGATATCGCAAAGTGTTTCACCAGTGGGAGTCATCTGGTCAGTTGTGGGACTGATGCCATTAGTGTCATTGCAAGGGATGACAGTGCCCCACAAAGCGGTAGATGTATCATCGGAAGCAGAGTTCACTCTGCGTGTCAATGGTTTGCTTGCTTAGACTGCCGCAGTGCTTGTGGAACCCGTAACATTCGGGTAGCCAACCAATGCGTCCTCTATGTCAGCTAGGAACGTCTAGAGTACTAGAGAATGTGGCAGTTGGATgtgaatgaatttgcaaaagcaAATTGAATTTATTAATCAATGATAATGATTAATCATAACTGGATAGGCTATCTGGGAATtaaactttaattaacctgaGAAGTTGGTTCATCTCGGTTAATATAGGAATTTTAAAATTGTCTCATTTGTAGAAAGAACCTGAAAAGGTATGTTCTACAATTGAACTTATTAAATTGAATGAGACAatgatatccaatcaattgagaTTATGTCTGTATTACCATAAGTGTAAACAGTAGTTTAAATGTTAGGGTACATTCCTCACCAGGCTCACATGTCCCTAAGGCCGAAGCCACATGGGTAGTCCTGAATGAGCTTTGCAAAGCAAATTTTACTGATTTAATCAATGTTAAGGATAAATCAAACCTTTTTAGGCTATTTGGAAATtaaactttaattaacctgaGAGCGTTGCTGTTTCAAGGTTAATGTGGAAAAGTTTAAATTGACTCATTTGTAGAAACCCATCCATTTGGATATTATTCAAAATGTCCATTGGAAAAGATAAATCTGTCAATTTGACCTCTTAGTTAAATTGAATCAGACATCGATATCCAATCAGTTGAGACTGACTGGATATCATAAGTAACCACTTGTTAAACGTGATCCACATTTGGGTGTCACCTACATTCTAATCAAAAGAAATGCACTGACGATTCGTCACCACCAGAGGTCAGTGATAGCACACGCTGAAATCAAATGGAAGTAAAAAAGGCGGGACTTCCGTTGCGCAAGCCGGAGGAATTTCAACGTGACACAGGAAAAAAAATGGCAGCTTTCCCTTTGTTAGCTTAGCATCTCATGCAAGCTAATCCTACTTTATACACTTTCAAGAATAACATTGGATCCCCTTCAGCAAGGGAACGGTTTTATGCAATATTTTGTCGGAACGCGCTGTAAACAAAGACATACACCGTTGGTCTACTCGCATGGAAACGTGAGAGATAATTATCACTAGTCAAGCTAATATCGACTCAGATTTCAATCGGCTGGCTCTTTGTCCTCACTCAAGAAATTAATAATGAGCCTTCTGAAACGTGGGAGGCAGAAATAGCACTACGTTTGGCCAAACTATTTCTATAAGTAGTTGGATCGTGTCTTAGTACTATAAATGTATAGCTAACGCTACCCCCTGGCTACGTCAGAGAACATCACGGAGGCATtctccagaacacacacacatggctcaCCAACTCTCTCTACTGATAACATAATCTGGGTGTTTTATGTAAACTGCTTGTCAATTTTATATTGGCTGAATCAAAATGAAAGCGTCATCCTATTTTAGATTCCTCGCACGATGCGTCATTATGTCTTGTCTCTAGTAAGGTTGAATGAGATGATGTGCTATTTATCAAATCGATTACCTAACGTTTAATTGATTATGTCATTGAATTAATTCATGCACCAATTAACTCATGaataacctggggcaccacggaagCATTCGTTTTTATAGAGCGGCTATCCCCTGAATCCACTCTACAAGATCTGAAGAtattttatatcaatagcagtcggtcattaatcgtcaccttattcagtctcatctgaaagttgtacaaTTAtgggttatcttcacgaaccccggctaacaagttgaatcaacagttcaaagttcataccaagttgccatacacAGCTCAGGCTCTATTCTGACTGGTgtagtcgaaattcatccttccaGCATGGTGATCGTCACCTCCAAGCCCTTTTAAACGTATGAACATCAGTCCTCACGTCATCgggaattaaatgttaatttcattAGGTTGAAATTTGCCCTTTTAAACGTATGGACATCAGTCCTCACGTAGTCGGCAACTGAGGTTTGACTTCCGTCAACGGGCTTTTGTAGTGGgggagagaagggcgtgtttcatggttctcaaccaatgtctgttcacttgggcgtggccactgagtgagcatagTTTACTTTATGAAAACAATTCTCCCATTTAGAAGCTGAAATTAATATTTTCACAAacagtttcatatttaaacatttaaattgcacaacaattccatgtcaGTCTGAtgactagaatgtgtagactttccaagatacaattTATGTCGTCTTATCATCAGATATAATGTCCCAGAcaccaactgatctgacatcatattctttaagtaccaacagacactttcaactggttggattacagaaatattgATATTTTTTCACAACCTTTTGATGTGACCATACTCTCTCTATGTTAAGAAAAGGCTTTCCAAGAGTCCATTCtgtagagtggagagaaaaggggaaaggtatttatgacGGTCACAAACCTCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1283588 True 2710 lncRNA 0.40 2 94105063 94107845

Neighbor

gene id symbol gene type direction distance location
LOC110515058 LOC106603753 coding upstream 68148 94023721 ~ 94036915 (+)
LOC110519288 NA coding upstream 97827 94005245 ~ 94007236 (+)
LOC110516968 LOC106593326 coding upstream 109722 93991609 ~ 93995341 (+)
LOC118937788 NA coding upstream 114283 93979678 ~ 93990780 (+)
LOC110514006 LOC106603827 coding upstream 170675 93923311 ~ 93934388 (+)
LOC118937790 LOC106592986 coding downstream 16507 94124352 ~ 94130915 (+)
LOC118937792 LOC106601968 coding downstream 96691 94204536 ~ 94282403 (+)
LOC110487474 LOC106606297 coding downstream 176035 94283880 ~ 94327815 (+)
LOC110487157 LOC106606292 coding downstream 184589 94292434 ~ 94301428 (+)
LOC110516947 LOC106606288 coding downstream 223096 94330941 ~ 94339981 (+)
G1128360 NA non-coding upstream 183615 93916522 ~ 93921448 (+)
G1128357 NA non-coding upstream 199079 93905386 ~ 93905984 (+)
G1128355 NA non-coding upstream 204287 93899675 ~ 93900776 (+)
G1128310 NA non-coding upstream 269580 93834127 ~ 93835483 (+)
G1128304 NA non-coding upstream 282552 93821656 ~ 93822511 (+)
G1128329 NA non-coding downstream 13890 94121735 ~ 94122212 (+)
G1128416 NA non-coding downstream 32802 94140647 ~ 94140853 (+)
G1128420 NA non-coding downstream 44802 94152647 ~ 94152866 (+)
G1128431 NA non-coding downstream 77716 94185561 ~ 94188073 (+)
LOC110485300 LOC106581592 other upstream 20893 94065500 ~ 94116043 (+)
G1128318 NA other upstream 261966 93842769 ~ 93843097 (+)
LOC110534257 dpod1 other upstream 502938 93544837 ~ 93602139 (+)
G1128189 NA other upstream 648103 93455845 ~ 93456960 (+)
G1128105 NA other upstream 832803 93271888 ~ 93272260 (+)
G1129047 NA other downstream 629924 94737769 ~ 94833934 (+)
G1129576 NA other downstream 1086541 95194386 ~ 95195280 (+)
LOC110516622 LOC105012861 other downstream 1104459 94934381 ~ 95232039 (+)
G1129591 LOC106601742 other downstream 1144575 95252420 ~ 95253323 (+)
G1129601 LOC106601741 other downstream 1158673 95266518 ~ 95267056 (+)

Expression


Co-expression Network