G1129668


Basic Information

Item Value
gene id G1129668
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 95310944 ~ 95312262 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1285216
GTTTAATAATTTATTGTTCCCAAGGAGGTACAACCATATTAAATTCCTTACCCGTTTAATACAGTGACTCGAGAATTGACAAAACCCACAAACACTTTACTGAGAAATAAGGATGAGTGCATACCTAAGACAAAATCATAAACCATTTATTTCAAATCTAAAATGCCACCTCGTTAGCTCCATTGACCGATAGAGAGAAGTGGGTgacaagtgtgtgtttgtgtgtcatgcAGTCATTCCTTTCCTGGATCCTTCCTGTTTGTCTGACACCTACACTGCAACATTCCATTCCAAATCAGTGAGAAGAAGTGACACTAAGGATAGATGCACATTACACAACAAGCACCTTGCCCTTTCTATAACTGAAAGGTGACCGTACCCATACTGAAAGGTGACCGTACCGAGACTGAAAGGTGACCGTACCCATACTGAAAGGTTGTAACAGTAGCCCTGCTGAGCTACACTGAAAGGTTGTAACAGTAGCCCTGCTGAGCTACACTGAAAGGTTGTAACAGTAGCCCTGCTGAGCTACACTGAAATGTATCCTCTTCCACTTTCCAACTCACTGCACCATCTTTCCATTGGCAAACAAACTTTTCCAAAACCGCTCAAAAAAAATGCCCAAACCACTGAGAATAGAAAACATGCACTGGTTTATGTCATGCGGTGGAGATGCAAGCTAGTGGATACTTGTGTTTCATTATGAGGGGAACTATATGACAAGTTTCCAGTTTTCCTTCGGAGACGACTACAGATGAGCACGGATGAACACGTCAAACAGAACTCTAAGAGGAAGAAGAAATAAGGTTCCAAAAACATTCATTCCATTGTTGTCATTGTAATTTTTGTTTCTCAGTCCTCCTTGTGGTCTGCAACAAAAAGGCAGTGTCGAATTCCACTGGTCATCCTTTCCTATGTCTCCTCTGACCAGATGGGCAGCTCAAGAATCTCTGGTGGCGAGTGGCTGTGAGGGATATATCCCAGTACAACCTCACAGATCTCTGCACTCCCCGGCGGCCATTGTTAATGACATCATCATGGTGTCCTTCCCAAGCAAAGGCACTGGGTTCCTATGACAAGGGGTGGCTGAGACAACGGCCGTGTAACATTGCGCATTGTCACACTGGCCCCTGATACTAGTGCCCTCTTCCACATTGTTGATTGTGTGAGGTCTGCAGGGTCTCTTTGGGAAGTTCTGACTGAAGATGCCCACTAATGAGCAGTCAGGGGTGTTGGGTCCTCAATTGTGGCAGTTGTAACACACTCAGTGAATCTCAATATGGA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1285216 True 1284 lncRNA 0.44 2 95310944 95312262

Neighbor

gene id symbol gene type direction distance location
LOC110538756 LOC108245165 coding downstream 1181 95300960 ~ 95309763 (-)
LOC118936310 LOC106601672 coding downstream 14836 95287208 ~ 95296108 (-)
LOC110538752 LOC106606738 coding downstream 32850 95269361 ~ 95278094 (-)
LOC110539029 LOC106601741 coding downstream 42456 95254631 ~ 95268488 (-)
LOC110485321 LOC106606309 coding downstream 524673 94713944 ~ 94786271 (-)
LOC118937798 LOC106606721 coding upstream 68123 95380385 ~ 95388481 (-)
LOC110486837 LOC105026133 coding upstream 82998 95395260 ~ 95621138 (-)
LOC110538778 NA coding upstream 682983 95995245 ~ 95996642 (-)
LOC118937923 NA coding upstream 683127 95995389 ~ 95995530 (-)
LOC118937801 NA coding upstream 993606 96209246 ~ 96313547 (-)
G1129547 NA non-coding downstream 208132 95098960 ~ 95102812 (-)
G1129536 NA non-coding downstream 242754 95066279 ~ 95068190 (-)
G1129531 NA non-coding downstream 253820 95056505 ~ 95057124 (-)
G1129524 NA non-coding downstream 257142 95047977 ~ 95053802 (-)
G1129489 NA non-coding downstream 347266 94963371 ~ 94963678 (-)
G1129692 NA non-coding upstream 62003 95374265 ~ 95377374 (-)
G1129717 NA non-coding upstream 77154 95389416 ~ 95389641 (-)
G1129719 NA non-coding upstream 77472 95389734 ~ 95390286 (-)
G1129953 NA non-coding upstream 83396 95395658 ~ 95396085 (-)
G1129959 NA non-coding upstream 108360 95420622 ~ 95420904 (-)
G1129544 NA other downstream 217851 95092622 ~ 95093093 (-)
LOC110511881 LOC106606292 other downstream 852746 94450540 ~ 94464106 (-)
G1128822 LOC106606284 other downstream 1035762 94274562 ~ 94275182 (-)
G1128814 NA other downstream 1058556 94251001 ~ 94252388 (-)
LOC110487111 LOC106606373 other downstream 1129347 94179962 ~ 94190977 (-)
G1129951 NA other upstream 79939 95392201 ~ 95393967 (-)
G1130049 NA other upstream 313496 95625758 ~ 95626165 (-)
G1130145 NA other upstream 532845 95845107 ~ 95846283 (-)
LOC110516715 LOC103469064 other upstream 1080137 96392239 ~ 96435793 (-)
G1130893 NA other upstream 1390145 96701694 ~ 96705588 (-)

Expression


Co-expression Network