G1129808


Basic Information

Item Value
gene id G1129808
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 95570661 ~ 95571211 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1285374
ctagatgtcaacagtcaatagaactttgtctgatgactctaatgtgaaggagggtcgaatgacacaggaaatagtcaccactgccacgagttgaccatgcatTCACTATGCGCGTTCACAAgggaaggacctgcgttccaccggtcatctgaagtcattctaattctccggttggaacgttattcaagatgtatgtaaacaacattctaaagattgattcagtacatcgtttgacatgtttctactgactgttacggaacttttggacatttcgtcacgttatagtggacgcgctttgtgactttggaattgtttaccaaacgcgctaaccaaagtagctaattggacataaataacggacattttcgaacaaatcaagcatttattgtaaACTGGGTAAAGCCATCTTGAGGAGGATTTGGGGAGATTTGATGGTTGAATTACTGTTAGTGAGGCTCCCTGGGACAGACTTTTTGCCTTTTGCATATGTGTGTacgtatctgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtatgtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1285374 True 551 lncRNA 0.42 1 95570661 95571211
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110486798 LOC105026136 coding upstream 193283 95327588 ~ 95377378 (+)
LOC110538757 NA coding upstream 258393 95310182 ~ 95312268 (+)
LOC110513898 LOC106601743 coding upstream 270131 95295161 ~ 95300530 (+)
LOC110538753 LOC106606737 coding upstream 288391 95278455 ~ 95286705 (+)
LOC110516622 LOC105012861 coding upstream 338622 94934381 ~ 95232039 (+)
LOC110538762 NA coding downstream 41723 95612934 ~ 95618161 (+)
LOC110538761 LOC106606716 coding downstream 58283 95629494 ~ 95815227 (+)
LOC110486806 LOC106606638 coding downstream 252671 95823882 ~ 95848439 (+)
LOC110539033 LOC106599243 coding downstream 383744 95954955 ~ 95994774 (+)
LOC110538768 ern1 coding downstream 425508 95996719 ~ 96026801 (+)
G1129805 NA non-coding upstream 1965 95568476 ~ 95568696 (+)
G1129804 NA non-coding upstream 3622 95566811 ~ 95567039 (+)
G1129771 NA non-coding upstream 54127 95516178 ~ 95516534 (+)
G1129766 NA non-coding upstream 73480 95496337 ~ 95497181 (+)
G1129763 NA non-coding upstream 84878 95485535 ~ 95485783 (+)
G1129809 NA non-coding downstream 185 95571396 ~ 95571686 (+)
G1129810 NA non-coding downstream 706 95571917 ~ 95572164 (+)
G1129814 NA non-coding downstream 5005 95576216 ~ 95576542 (+)
G1129815 NA non-coding downstream 5440 95576651 ~ 95576851 (+)
G1129827 NA non-coding downstream 21802 95593013 ~ 95622605 (+)
G1129772 NA other upstream 51019 95519178 ~ 95519642 (+)
G1129613 LOC106601744 other upstream 260964 95300784 ~ 95309697 (+)
G1129601 LOC106601741 other upstream 303605 95266518 ~ 95267056 (+)
G1129591 LOC106601742 other upstream 317338 95252420 ~ 95253323 (+)
G1130570 alg1 other downstream 1047045 96618256 ~ 96633452 (+)
LOC118937804 LOC106591169 other downstream 1107321 96676774 ~ 96702725 (+)
G1130780 LOC106606334 other downstream 1591051 97162262 ~ 97163079 (+)
G1131438 NA other downstream 2249513 97820724 ~ 97822057 (+)

Expression

G1129808 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
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G1129808 Expression in each Bioproject

Bar chart with 20 bars.
G1129808 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 400.
End of interactive chart.

Co-expression Network