G1130146


Basic Information

Item Value
gene id G1130146
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 95847138 ~ 95848920 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1285752
ATTAAAGTACCGAGGCATCTTTCCAATGGAGCTCTACAGAATAGAATGCATCATTTACAGTTTTAATACAAGTGGAACAAAAAAAAGCCatgaaaaatataaaacaaacGTGATTACAAGGAGATGGTAAAAAGGCATAGTAATAAAATCTCTTTTGAACATAAGCCCCTTGTGAAAACCAAGGGAGTATCATACCCCGATAACAGGGTAGTAACATGGTAAAGGGACCCATGTAGGCACAGCTACTGTACTCAGTTAAACACTACGGCTTCCTCCAaacgccaccctattccctatggagtGCACTACTCTTGCCCTGGTCATAGGGAAGAGGGTTCCATTTCAGACGCAGCATCGTAGTGTGTGTTAGCATCATAACCTCTTCCTCTGTCAAGGGTCAACAAGACACACAGGAGAGACTGGTCAATTCAACACAATCAGAGGTGTAAATACCACTAACATTTGTGGGGgggacaaaacattttttttggggggggggggggggactagtcTCTCGAAGGCAGACATACTCATTAGGACATGTATCAGAACTGGTTTTGCTAAACAACATGAAAATgtgcgtttcttattggacagatCCAGGAAAGGTAGTCCCTCCCCCTTTGTCAGTTTCCTTCCGTTCgacctaatgaatacacccctggatctgtcgttctgctcacAAGCCAGGACATCAAGGAATGAGGGGTGGCTATACACAAAACAACTGTTGAGCTTGGCTGGTATAGATTCATTTGGTGGGCTTGTCTTTAACAGGTGTAAATCTATGTTAGCATGTTTCTGCAATTTGGGGTAGTTTGGTGCTCTGGGCCATTTAGGGCCAGTTCGGGGGTAGTGTTGTCCTAAGTGTGGGCTCGTTCCCTGTGCAAAGCCTGGGCAACAAAACAAAGGCACTGAGAGATGAGACTTACAGGGCTGTGGTACCTGTGCTATACCACACCGTGAAGTTAGGGCAGGAAGTCACTGATCAGAACAGAAAACACTGCCACAGGATTAGTTGACAAGGCAGGAAAGGGGAGGGTGGAAAACTAAATACTTTGCATTTGAAATATTGGAGACGACATCTCCCAATTCTCCAAGCAGCTTGTCCATCCACAGGACTATGGGGAGGGGAGTGACATTTCAATAAATTATTTATAAACTCTTTACATTTATCAAAAAAATCATTATATGTCCATCTGCATATACATCTAGGGTTGTTGGTAGAGGCAGGCTCAGATAGGGCACCAGTCCCAACTTTCACCTCTCAACCTTTCACCTCTAGCAGTCTCTCAGCTTTCAGAGGTCCCAGCCTACTCCCTCAGATAGTGGTCATTCAATTCACGTATAGTTTCTGGAACCCAACACCCGTATCCAAACCCAACCCACAGTCCACCATTTTCTCCTCTTTCATCTCCAAGACGTTAAATAGTTGTTAAATAGTCCTGTTGATGGCTACTCCTCTACTCCACTACTCCTGTACTCCACTCTCCATCCTTCATTGGCCAAGCTTCTTCAACAGAATCTCCAGTCATCAGTCCTTAAGACTCTCTGGTGGAACAGGGGGGTGGTGTCCATGCAGTTTCTGTAATACATTCCTCTGGTACTTCTGGAGGGGTATCAGTCCATCCTCTCCACCTTGCCCAGGATCTTCCCCTGGTACCTGGGCAGAACAGAGCTGTCATCCAACACCTCCTCGAACACGGCTCCACACTTAAACTCATCACTGGCCCTCTTGAAGT

Function

NR:

description
axin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1285752 True 1742 lncRNA 0.46 2 95847138 95848920

Neighbor

gene id symbol gene type direction distance location
LOC110486837 LOC105026133 coding downstream 226000 95395260 ~ 95621138 (-)
LOC118937798 LOC106606721 coding downstream 458657 95380385 ~ 95388481 (-)
LOC110538756 LOC108245165 coding downstream 537375 95300960 ~ 95309763 (-)
LOC118936310 LOC106601672 coding downstream 551030 95287208 ~ 95296108 (-)
LOC110538752 LOC106606738 coding downstream 569044 95269361 ~ 95278094 (-)
LOC110538778 NA coding upstream 146325 95995245 ~ 95996642 (-)
LOC118937923 NA coding upstream 146469 95995389 ~ 95995530 (-)
LOC118937801 NA coding upstream 456948 96209246 ~ 96313547 (-)
LOC118937802 fbxl16 coding upstream 465406 96314326 ~ 96365986 (-)
LOC110516715 LOC103469064 coding upstream 543319 96392239 ~ 96435793 (-)
G1130145 NA non-coding downstream 855 95845107 ~ 95846283 (-)
G1130137 NA non-coding downstream 23383 95823447 ~ 95823755 (-)
G1130112 NA non-coding downstream 88536 95751145 ~ 95758602 (-)
G1130075 NA non-coding downstream 167090 95674836 ~ 95680048 (-)
G1130074 NA non-coding downstream 172985 95673895 ~ 95674153 (-)
G1130151 NA non-coding upstream 23999 95872919 ~ 95873441 (-)
G1130155 NA non-coding upstream 44394 95893314 ~ 95896542 (-)
G1130156 NA non-coding upstream 49336 95898256 ~ 95907943 (-)
G1130157 NA non-coding upstream 59495 95908415 ~ 95909008 (-)
G1130167 NA non-coding upstream 76603 95925523 ~ 95925924 (-)
G1130049 NA other downstream 220973 95625758 ~ 95626165 (-)
G1129951 NA other downstream 453171 95392201 ~ 95393967 (-)
G1129544 NA other downstream 754045 95092622 ~ 95093093 (-)
LOC110511881 LOC106606292 other downstream 1388940 94450540 ~ 94464106 (-)
G1130893 NA other upstream 853487 96701694 ~ 96705588 (-)
LOC110518479 LOC106591170 other upstream 865871 96714290 ~ 96728931 (-)
LOC110487147 LOC106601974 other upstream 1013223 96858442 ~ 96867462 (-)
LOC110519445 smg1 other upstream 1127255 96898792 ~ 97043408 (-)

Expression


Co-expression Network