G1130170


Basic Information

Item Value
gene id G1130170
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 95929209 ~ 95929685 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1285780
ggttagttaggtggttggatacagggtcagggttagttagggggttggatacagggtcagggttagttagctggttggatacagggtcaaggtcagttaggtggttggatacagggtcagggttagttaggtggttggatacagggttagggttagttaggtggttggatacagagttagggttagttaggtggttggaaacagggttagggttagttaggtggttggatacagggttagggttagttagggggttggatacagggtcaggattagttagggggttggatacagggtcagggttagttaggtggttggatacagggttagggttagttaggtggttggatacagggttagggttagttaggtggttggatacagagttagggttagttaggtggttggatacagggttagggttagttaggtggttggatacagggttagggttagttaggtggttggatacagggt

Function

NR:

description
uncharacterized protein LOC110514845

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1285780 True 477 lncRNA 0.48 1 95929209 95929685

Neighbor

gene id symbol gene type direction distance location
LOC110486806 LOC106606638 coding upstream 80770 95823882 ~ 95848439 (+)
LOC110538761 LOC106606716 coding upstream 113982 95629494 ~ 95815227 (+)
LOC110538762 NA coding upstream 311048 95612934 ~ 95618161 (+)
LOC110486798 LOC105026136 coding upstream 551831 95327588 ~ 95377378 (+)
LOC110538757 NA coding upstream 616941 95310182 ~ 95312268 (+)
LOC110539033 LOC106599243 coding downstream 25270 95954955 ~ 95994774 (+)
LOC110538768 ern1 coding downstream 67034 95996719 ~ 96026801 (+)
LOC110538780 LOC106606683 coding downstream 99496 96029181 ~ 96102791 (+)
LOC118937799 NA coding downstream 134530 96064215 ~ 96065214 (+)
LOC110538781 LOC106595186 coding downstream 143220 96072905 ~ 96080552 (+)
G1130168 NA non-coding upstream 844 95927752 ~ 95928365 (+)
G1129945 NA non-coding upstream 58408 95870504 ~ 95870801 (+)
G1129943 NA non-coding upstream 59388 95869546 ~ 95869821 (+)
G1129931 NA non-coding upstream 65380 95829997 ~ 95863829 (+)
G1129929 NA non-coding upstream 109460 95819336 ~ 95819749 (+)
G1130176 NA non-coding downstream 18382 95948067 ~ 95948285 (+)
G1130177 NA non-coding downstream 23111 95952796 ~ 95953041 (+)
G1130178 NA non-coding downstream 24011 95953696 ~ 95953928 (+)
G1130181 NA non-coding downstream 25758 95955443 ~ 95955751 (+)
G1129772 NA other upstream 409567 95519178 ~ 95519642 (+)
G1129613 LOC106601744 other upstream 619512 95300784 ~ 95309697 (+)
G1129601 LOC106601741 other upstream 662153 95266518 ~ 95267056 (+)
G1129591 LOC106601742 other upstream 675886 95252420 ~ 95253323 (+)
G1130570 alg1 other downstream 688571 96618256 ~ 96633452 (+)
LOC118937804 LOC106591169 other downstream 748847 96676774 ~ 96702725 (+)
G1130780 LOC106606334 other downstream 1232577 97162262 ~ 97163079 (+)
G1131438 NA other downstream 1891039 97820724 ~ 97822057 (+)
LOC118936514 smim22 other downstream 2330324 98259570 ~ 98268855 (+)

Expression


Co-expression Network