Gene
RNA
| Item | Value |
|---|---|
| gene id | G1130311 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 96174611 ~ 96174848 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1285960 | True | 238 | lncRNA | 0.51 | 1 | 96174611 | 96174848 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tbc1d16 | LOC106606686 | coding | upstream | 9217 | 96139773 ~ 96165394 (+) |
| LOC110539035 | LOC106588841 | coding | upstream | 35575 | 96124942 ~ 96139036 (+) |
| LOC110538773 | LOC106606683 | coding | upstream | 58053 | 96103366 ~ 96116558 (+) |
| LOC110538780 | LOC106606683 | coding | upstream | 71820 | 96029181 ~ 96102791 (+) |
| LOC110538781 | LOC106595186 | coding | upstream | 94059 | 96072905 ~ 96080552 (+) |
| LOC118937800 | LOC106606337 | coding | downstream | 47000 | 96221848 ~ 96301339 (+) |
| LOC110517345 | LOC106596483 | coding | downstream | 368022 | 96542870 ~ 96594168 (+) |
| LOC110512418 | alg1 | coding | downstream | 443391 | 96618239 ~ 96633339 (+) |
| LOC118937803 | NA | coding | downstream | 452260 | 96627108 ~ 96630599 (+) |
| LOC110494405 | pigq | coding | downstream | 462350 | 96637198 ~ 96670446 (+) |
| G1130225 | NA | non-coding | upstream | 51965 | 96122399 ~ 96122646 (+) |
| G1130213 | NA | non-coding | upstream | 104946 | 96069389 ~ 96069665 (+) |
| G1130212 | LOC106601757 | non-coding | upstream | 105429 | 96068886 ~ 96069182 (+) |
| LOC110539033 | LOC106599243 | non-coding | upstream | 179841 | 95954955 ~ 95994774 (+) |
| G1130181 | NA | non-coding | upstream | 218860 | 95955443 ~ 95955751 (+) |
| G1130325 | NA | non-coding | downstream | 26233 | 96201081 ~ 96201723 (+) |
| G1130326 | NA | non-coding | downstream | 29928 | 96204776 ~ 96207210 (+) |
| G1130337 | NA | non-coding | downstream | 59147 | 96233995 ~ 96235139 (+) |
| G1130341 | NA | non-coding | downstream | 72483 | 96247331 ~ 96251632 (+) |
| G1130342 | NA | non-coding | downstream | 76001 | 96250849 ~ 96251175 (+) |
| LOC110538761 | LOC106606716 | other | upstream | 544036 | 95629494 ~ 95815227 (+) |
| G1129772 | NA | other | upstream | 654969 | 95519178 ~ 95519642 (+) |
| G1129613 | LOC106601744 | other | upstream | 864914 | 95300784 ~ 95309697 (+) |
| G1129601 | LOC106601741 | other | upstream | 907555 | 95266518 ~ 95267056 (+) |
| G1129591 | LOC106601742 | other | upstream | 921288 | 95252420 ~ 95253323 (+) |
| G1130570 | alg1 | other | downstream | 443408 | 96618256 ~ 96633452 (+) |
| LOC118937804 | LOC106591169 | other | downstream | 503684 | 96676774 ~ 96702725 (+) |
| G1130780 | LOC106606334 | other | downstream | 987414 | 97162262 ~ 97163079 (+) |
| G1131438 | NA | other | downstream | 1645876 | 97820724 ~ 97822057 (+) |
| LOC118936514 | smim22 | other | downstream | 2085161 | 98259570 ~ 98268855 (+) |
