G1130456


Basic Information

Item Value
gene id G1130456
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 96304472 ~ 96305537 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1286168
GGTAGATCAACGGTGTTTATTGATGTGTAAAACAAGGGTCTATCAGGAGGCAGCGTACAGAACATTAGGCTACAGCACTATAAAACATCAGAGACaggagataaacaacaacacaaacattgTCACGTCACGGgtgggtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatttataggCAGCCCACAGCTGAAGAGGCTGTGTACCAGGTCAACACTAGGTATGTAAATGAGGGAGGGATGTACCTTTTTAATGGACAACAGTGGGTGATGATCTAGTGATCGGGTCTAAAAACAGACAGCTAAAGAAGAGGCAGTCAGTCTGTGAGGACAGGACAGCCTTTAAAAtggggaaaaacacacacacacacacacacggttgtcACAGGACCCGTTTCCTcaacacagattaagcctataGTCCCGGACTACGAGACACGTTCACTGGAGAAGGCTTATAGGACGAAGTGGGCTTTAATCTGTGTGAACGGAAAAAACGTTCCTCCTAGCATCACATTTCACATGTCAACGTTAAAACAGGAAGTTGGGGGTCTCTAAGTTACAGTTAGGCACATTCAAAGCCATAAAACAGAGGAGGGTAACCTGGTCTAATCTAATCCTGTCTGCATCATGTATTGTTATCTCCCATAACATAGTATCATTGAGAGCTACTGGGAATTTTGCAATCCGAGACActttggtgagagagagagtacagtttGTGTCCTCTTGTCTCCTGACTCCCGGGGTCATTCCTCCACTTGGCCTCTAGGTGGAGCCCTCTCTCCAAACAGCACAGCTCGCCATCGGGGAAGGAGACAGAAGGGATCTATCTATAAAGGAGGTCCCTCTATACACCACACAGGAAGACCCCTGGAGGTAAACTGGACTGTGTACGTATGGATGGACACGTGTGTATGGATAGGTATGTGTGGATCGACGTTTACCGCAGGTGGAAAAgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1286168 True 992 lncRNA 0.47 2 96304472 96305537

Neighbor

gene id symbol gene type direction distance location
LOC110538778 NA coding downstream 307830 95995245 ~ 95996642 (-)
LOC118937923 NA coding downstream 308942 95995389 ~ 95995530 (-)
LOC110486837 LOC105026133 coding downstream 683334 95395260 ~ 95621138 (-)
LOC118937798 LOC106606721 coding downstream 915991 95380385 ~ 95388481 (-)
LOC110538756 LOC108245165 coding downstream 994709 95300960 ~ 95309763 (-)
LOC118937801 NA coding upstream 331 96209246 ~ 96313547 (-)
LOC118937802 fbxl16 coding upstream 8789 96314326 ~ 96365986 (-)
LOC110516715 LOC103469064 coding upstream 86702 96392239 ~ 96435793 (-)
LOC110538851 LOC106601944 coding upstream 193007 96498544 ~ 96505238 (-)
LOC110494398 clg11h16orf89 coding upstream 299837 96605374 ~ 96610119 (-)
G1130478 NA non-coding downstream 19527 96284479 ~ 96284945 (-)
G1130468 NA non-coding downstream 52733 96236782 ~ 96251739 (-)
G1130471 NA non-coding downstream 61083 96242975 ~ 96243389 (-)
G1130443 NA non-coding downstream 79211 96224817 ~ 96225261 (-)
G1130465 NA non-coding downstream 79831 96222608 ~ 96224641 (-)
G1130485 NA non-coding upstream 16306 96321843 ~ 96324242 (-)
G1130497 NA non-coding upstream 58468 96364005 ~ 96364383 (-)
G1130500 NA non-coding upstream 66480 96372017 ~ 96373070 (-)
G1130502 NA non-coding upstream 76608 96382145 ~ 96382371 (-)
G1130504 NA non-coding upstream 80524 96386061 ~ 96387134 (-)
G1130145 NA other downstream 458189 95845107 ~ 95846283 (-)
G1130049 NA other downstream 678307 95625758 ~ 95626165 (-)
G1129951 NA other downstream 910505 95392201 ~ 95393967 (-)
G1129544 NA other downstream 1211379 95092622 ~ 95093093 (-)
LOC110511881 LOC106606292 other downstream 1846274 94450540 ~ 94464106 (-)
G1130893 NA other upstream 396870 96701694 ~ 96705588 (-)
LOC110518479 LOC106591170 other upstream 409254 96714290 ~ 96728931 (-)
LOC110487147 LOC106601974 other upstream 556606 96858442 ~ 96867462 (-)
LOC110519445 smg1 other upstream 670638 96898792 ~ 97043408 (-)

Expression


Co-expression Network