G1130374


Basic Information

Item Value
gene id G1130374
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 96375426 ~ 96375679 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1286046
CAGCATACCATGCTTCACTCCATAGAAACCCCACTGACCCAGCATACCATGCTTCACTCCATAGAAACCCCACTGACCCAGCATACCATGCTTCACTCCATATAAACCCCACTGACCCAGCATACCATGCTTCACTCCATAGAGACCCCACTGACCCAGCATACCATGCTTCACTCCATAGAGACCCCACTGACCCAGCATACCATGCTTCACTCCATAGAGACCCCATTGACCCAGCATACCATGCTTCACTC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106589099

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1286046 True 254 lncRNA 0.52 1 96375426 96375679

Neighbor

gene id symbol gene type direction distance location
LOC118937800 LOC106606337 coding upstream 74087 96221848 ~ 96301339 (+)
tbc1d16 LOC106606686 coding upstream 210032 96139773 ~ 96165394 (+)
LOC110539035 LOC106588841 coding upstream 236390 96124942 ~ 96139036 (+)
LOC110538773 LOC106606683 coding upstream 258868 96103366 ~ 96116558 (+)
LOC110538781 LOC106595186 coding upstream 294874 96072905 ~ 96080552 (+)
LOC110517345 LOC106596483 coding downstream 167191 96542870 ~ 96594168 (+)
LOC110512418 alg1 coding downstream 242560 96618239 ~ 96633339 (+)
LOC118937803 NA coding downstream 251429 96627108 ~ 96630599 (+)
LOC110494405 pigq coding downstream 261519 96637198 ~ 96670446 (+)
LOC110494408 NA coding downstream 295786 96671465 ~ 96672625 (+)
G1130370 NA non-coding upstream 8114 96367043 ~ 96367312 (+)
G1130305 NA non-coding upstream 68304 96305868 ~ 96307122 (+)
G1130304 NA non-coding upstream 69889 96301829 ~ 96305537 (+)
G1130341 NA non-coding upstream 123794 96247331 ~ 96251632 (+)
G1130342 NA non-coding upstream 124251 96250849 ~ 96251175 (+)
G1130376 NA non-coding downstream 4909 96380588 ~ 96380801 (+)
G1130379 NA non-coding downstream 9727 96385406 ~ 96385663 (+)
G1130380 NA non-coding downstream 10366 96386045 ~ 96387103 (+)
G1130381 NA non-coding downstream 12593 96388272 ~ 96389118 (+)
G1130382 NA non-coding downstream 13455 96389134 ~ 96390421 (+)
LOC110538761 LOC106606716 other upstream 744851 95629494 ~ 95815227 (+)
G1129772 NA other upstream 855784 95519178 ~ 95519642 (+)
G1129613 LOC106601744 other upstream 1065729 95300784 ~ 95309697 (+)
G1129601 LOC106601741 other upstream 1108370 95266518 ~ 95267056 (+)
G1129591 LOC106601742 other upstream 1122103 95252420 ~ 95253323 (+)
G1130570 alg1 other downstream 242577 96618256 ~ 96633452 (+)
LOC118937804 LOC106591169 other downstream 302853 96676774 ~ 96702725 (+)
G1130780 LOC106606334 other downstream 786583 97162262 ~ 97163079 (+)
G1131438 NA other downstream 1445045 97820724 ~ 97822057 (+)
LOC118936514 smim22 other downstream 1884330 98259570 ~ 98268855 (+)

Expression


Co-expression Network