G1130379


Basic Information

Item Value
gene id G1130379
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 96385406 ~ 96385663 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1286051
GATGGTTAGTTTATGATTAGTTGATGATTCGTTGATGATTCGTTTATGATTTGTTTATGATTAGTTGATGGTTAGTTGATAATTAGTTGATGATTCGTTTATGATTCGTTGATGATTCGTTGATGATTCGTTGATGATTCGTTGATGATTCGTTTATGATTAGTTGATGGTTAGTTGATAATTAGTTGATGATTCATTTATGATTCGTTTATGATTCgttgatgattagttgatgaTTCGTTTATGATTCGTTTATGA

Function

NR:

description
Hemagglutinin/amebocyte aggregation factor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1286051 True 258 lncRNA 0.29 1 96385406 96385663

Neighbor

gene id symbol gene type direction distance location
LOC118937800 LOC106606337 coding upstream 84067 96221848 ~ 96301339 (+)
tbc1d16 LOC106606686 coding upstream 220012 96139773 ~ 96165394 (+)
LOC110539035 LOC106588841 coding upstream 246370 96124942 ~ 96139036 (+)
LOC110538773 LOC106606683 coding upstream 268848 96103366 ~ 96116558 (+)
LOC110538781 LOC106595186 coding upstream 304854 96072905 ~ 96080552 (+)
LOC110517345 LOC106596483 coding downstream 157207 96542870 ~ 96594168 (+)
LOC110512418 alg1 coding downstream 232576 96618239 ~ 96633339 (+)
LOC118937803 NA coding downstream 241445 96627108 ~ 96630599 (+)
LOC110494405 pigq coding downstream 251535 96637198 ~ 96670446 (+)
LOC110494408 NA coding downstream 285802 96671465 ~ 96672625 (+)
G1130376 NA non-coding upstream 4605 96380588 ~ 96380801 (+)
G1130374 NA non-coding upstream 9727 96375426 ~ 96375679 (+)
G1130370 NA non-coding upstream 18094 96367043 ~ 96367312 (+)
G1130305 NA non-coding upstream 78284 96305868 ~ 96307122 (+)
G1130304 NA non-coding upstream 79869 96301829 ~ 96305537 (+)
G1130380 NA non-coding downstream 382 96386045 ~ 96387103 (+)
G1130381 NA non-coding downstream 2609 96388272 ~ 96389118 (+)
G1130382 NA non-coding downstream 3471 96389134 ~ 96390421 (+)
G1130408 NA non-coding downstream 76008 96461671 ~ 96522096 (+)
G1130425 NA non-coding downstream 120421 96506084 ~ 96507660 (+)
LOC110538761 LOC106606716 other upstream 754831 95629494 ~ 95815227 (+)
G1129772 NA other upstream 865764 95519178 ~ 95519642 (+)
G1129613 LOC106601744 other upstream 1075709 95300784 ~ 95309697 (+)
G1129601 LOC106601741 other upstream 1118350 95266518 ~ 95267056 (+)
G1129591 LOC106601742 other upstream 1132083 95252420 ~ 95253323 (+)
G1130570 alg1 other downstream 232593 96618256 ~ 96633452 (+)
LOC118937804 LOC106591169 other downstream 292869 96676774 ~ 96702725 (+)
G1130780 LOC106606334 other downstream 776599 97162262 ~ 97163079 (+)
G1131438 NA other downstream 1435061 97820724 ~ 97822057 (+)
LOC118936514 smim22 other downstream 1874346 98259570 ~ 98268855 (+)

Expression


Co-expression Network