G1130505


Basic Information

Item Value
gene id G1130505
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 96389587 ~ 96390301 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1286236
ctcaatcagaggcaggtgtcgttagttgtctctgattgagaatcatacttaggtagcctggtttcacttttgagtggtgggtgtttgttttccgtgtcagtgtttgtcgccacacggtactgtttcggtttcggttcattttcacgtttattgttttgtttttcatagtgttcagttcatgtcttataataaacgttatggacacctaccacgctgcgcattggtcctccgatccttcttctcgcttctcctcctcagatgaGGAATGTCGTTAcaggtgaagtgaaatttaaataattacttttttcaaaacattctaaaaaataagaaacggaaaagtggtgcgtgtatATGTGTTCacatgaagcccctaaataagatctggtgcaaccaattaccttcagaagtcacataattagttaaataaagtccacctgtgtgaaatctaagtgtcacatgatctcagtatatatacacctgttctgaaaggccccagagtctgcaacaccattaagtacagatcagggttgggttataaaaaaatatctgaaactttgatcatcccacagagcaccattaaatccattattaaataaTTCAAAGAATATGGcactacaacaaacctgccaagagagg

Function

NR:

description
PREDICTED: high mobility group protein B2 isoform X1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1286236 True 636 lncRNA 0.39 2 96389587 96390301

Neighbor

gene id symbol gene type direction distance location
LOC118937802 fbxl16 coding downstream 23601 96314326 ~ 96365986 (-)
LOC118937801 NA coding downstream 76582 96209246 ~ 96313547 (-)
LOC110538778 NA coding downstream 392945 95995245 ~ 95996642 (-)
LOC118937923 NA coding downstream 394057 95995389 ~ 95995530 (-)
LOC110486837 LOC105026133 coding downstream 768449 95395260 ~ 95621138 (-)
LOC110516715 LOC103469064 coding upstream 1938 96392239 ~ 96435793 (-)
LOC110538851 LOC106601944 coding upstream 108243 96498544 ~ 96505238 (-)
LOC110494398 clg11h16orf89 coding upstream 215073 96605374 ~ 96610119 (-)
eef2kmt fa86a coding upstream 243113 96633414 ~ 96637111 (-)
LOC110518479 LOC106591170 coding upstream 323989 96714290 ~ 96728931 (-)
G1130504 NA non-coding downstream 2453 96386061 ~ 96387134 (-)
G1130502 NA non-coding downstream 7216 96382145 ~ 96382371 (-)
G1130500 NA non-coding downstream 16517 96372017 ~ 96373070 (-)
G1130497 NA non-coding downstream 25204 96364005 ~ 96364383 (-)
G1130485 NA non-coding downstream 65345 96321843 ~ 96324242 (-)
G1130506 NA non-coding upstream 322 96390623 ~ 96391019 (-)
G1130508 NA non-coding upstream 1275 96391576 ~ 96392181 (-)
G1130555 NA non-coding upstream 127900 96518201 ~ 96519223 (-)
G1130520 NA non-coding upstream 130568 96520869 ~ 96523946 (-)
G1130556 NA non-coding upstream 142351 96532652 ~ 96541692 (-)
G1130145 NA other downstream 543304 95845107 ~ 95846283 (-)
G1130049 NA other downstream 763422 95625758 ~ 95626165 (-)
G1129951 NA other downstream 995620 95392201 ~ 95393967 (-)
G1129544 NA other downstream 1296494 95092622 ~ 95093093 (-)
LOC110511881 LOC106606292 other downstream 1931389 94450540 ~ 94464106 (-)
G1130893 NA other upstream 312106 96701694 ~ 96705588 (-)
LOC110487147 LOC106601974 other upstream 471842 96858442 ~ 96867462 (-)
LOC110519445 smg1 other upstream 585874 96898792 ~ 97043408 (-)

Expression


Co-expression Network