G1130508


Basic Information

Item Value
gene id G1130508
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 96391576 ~ 96392181 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1286239
ACTTTCCAAAAATTCCAAGGTTTTCCGGAAATCCTGGTTGTAAAATTCTGGGACTCAGGTGGGAATAAAAAGCATAAAATTGGGAATCCTACAACCAGGAGGAAAACCTGGGGATTTACAACCCTAGTGTTGAGAAGTTGATGAAGACGATGCTGATCTCTGATTTTGTATTTTGGGCACCAATGGTTCAGGTTAGGAGAGGGGTATATAGTGTCATGCTTTGGTCTgaacaagtagtgcactatactgtatacagtgccttgtcaTGCTTTGGTCTgaacaagtagtgcactatactgtatacagtgcctcgcaaaattattcatccctcttggtgtttttcctattttgttgcattacaacctgtaatttaaatggatttttatttgggtttcatgtaatggacataaacacaaaatagtccaaattggtgaagtcacgttctgacctttatttcctttgttttgtctttatttagtatggtcagggcgtgagttggggtgggcagtctgtgtgtgtctttatttagtatggtcagggcgtgagttggggtggg

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1286239 True 556 lncRNA 0.40 2 96391576 96392181

Neighbor

gene id symbol gene type direction distance location
LOC118937802 fbxl16 coding downstream 25590 96314326 ~ 96365986 (-)
LOC118937801 NA coding downstream 78571 96209246 ~ 96313547 (-)
LOC110538778 NA coding downstream 394934 95995245 ~ 95996642 (-)
LOC118937923 NA coding downstream 396046 95995389 ~ 95995530 (-)
LOC110486837 LOC105026133 coding downstream 770438 95395260 ~ 95621138 (-)
LOC110516715 LOC103469064 coding upstream 58 96392239 ~ 96435793 (-)
LOC110538851 LOC106601944 coding upstream 106363 96498544 ~ 96505238 (-)
LOC110494398 clg11h16orf89 coding upstream 213193 96605374 ~ 96610119 (-)
eef2kmt fa86a coding upstream 241233 96633414 ~ 96637111 (-)
LOC110518479 LOC106591170 coding upstream 322109 96714290 ~ 96728931 (-)
G1130506 NA non-coding downstream 557 96390623 ~ 96391019 (-)
G1130505 NA non-coding downstream 1275 96389587 ~ 96390301 (-)
G1130504 NA non-coding downstream 4442 96386061 ~ 96387134 (-)
G1130502 NA non-coding downstream 9205 96382145 ~ 96382371 (-)
G1130500 NA non-coding downstream 18506 96372017 ~ 96373070 (-)
G1130555 NA non-coding upstream 126020 96518201 ~ 96519223 (-)
G1130520 NA non-coding upstream 128688 96520869 ~ 96523946 (-)
G1130556 NA non-coding upstream 140471 96532652 ~ 96541692 (-)
G1130845 NA non-coding upstream 187449 96579630 ~ 96579987 (-)
G1130847 LOC106601992 non-coding upstream 190329 96582510 ~ 96583012 (-)
G1130145 NA other downstream 545293 95845107 ~ 95846283 (-)
G1130049 NA other downstream 765411 95625758 ~ 95626165 (-)
G1129951 NA other downstream 997609 95392201 ~ 95393967 (-)
G1129544 NA other downstream 1298483 95092622 ~ 95093093 (-)
LOC110511881 LOC106606292 other downstream 1933378 94450540 ~ 94464106 (-)
G1130893 NA other upstream 310226 96701694 ~ 96705588 (-)
LOC110487147 LOC106601974 other upstream 469962 96858442 ~ 96867462 (-)
LOC110519445 smg1 other upstream 583994 96898792 ~ 97043408 (-)

Expression


Co-expression Network