Gene
RNA
| Item | Value |
|---|---|
| gene id | G1130598 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 96690626 ~ 96690906 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1286391 | True | 244 | lncRNA | 0.38 | 2 | 96690626 | 96690906 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494408 | NA | coding | upstream | 18001 | 96671465 ~ 96672625 (+) |
| LOC110494405 | pigq | coding | upstream | 20180 | 96637198 ~ 96670446 (+) |
| LOC110512418 | alg1 | coding | upstream | 57287 | 96618239 ~ 96633339 (+) |
| LOC118937803 | NA | coding | upstream | 60027 | 96627108 ~ 96630599 (+) |
| LOC110517345 | LOC106596483 | coding | upstream | 96458 | 96542870 ~ 96594168 (+) |
| LOC110485332 | LOC105030590 | coding | downstream | 77485 | 96768391 ~ 96838680 (+) |
| LOC118937805 | LOC106601973 | coding | downstream | 179016 | 96869922 ~ 96872737 (+) |
| LOC118937806 | clec19a | coding | downstream | 363935 | 97054841 ~ 97069129 (+) |
| LOC110539044 | mrp1 | coding | downstream | 549152 | 97240058 ~ 97298946 (+) |
| LOC110539053 | LOC106601961 | coding | downstream | 827434 | 97518340 ~ 97526372 (+) |
| G1130594 | NA | non-coding | upstream | 6672 | 96682192 ~ 96683954 (+) |
| G1130589 | NA | non-coding | upstream | 34900 | 96654343 ~ 96655726 (+) |
| G1130577 | NA | non-coding | upstream | 83528 | 96606799 ~ 96607098 (+) |
| G1130604 | NA | non-coding | downstream | 15772 | 96706678 ~ 96707052 (+) |
| G1130611 | NA | non-coding | downstream | 36939 | 96727845 ~ 96728202 (+) |
| G1130629 | NA | non-coding | downstream | 89003 | 96779909 ~ 96865354 (+) |
| G1130641 | NA | non-coding | downstream | 143826 | 96834732 ~ 96835297 (+) |
| G1130642 | NA | non-coding | downstream | 152065 | 96842971 ~ 96845964 (+) |
| G1130570 | alg1 | other | upstream | 57174 | 96618256 ~ 96633452 (+) |
| LOC110538761 | LOC106606716 | other | upstream | 1060051 | 95629494 ~ 95815227 (+) |
| G1129772 | NA | other | upstream | 1170984 | 95519178 ~ 95519642 (+) |
| G1129613 | LOC106601744 | other | upstream | 1380929 | 95300784 ~ 95309697 (+) |
| G1129601 | LOC106601741 | other | upstream | 1423570 | 95266518 ~ 95267056 (+) |
| G1130780 | LOC106606334 | other | downstream | 471356 | 97162262 ~ 97163079 (+) |
| G1131438 | NA | other | downstream | 1129818 | 97820724 ~ 97822057 (+) |
| LOC118936514 | smim22 | other | downstream | 1569103 | 98259570 ~ 98268855 (+) |
| G1132060 | NA | other | downstream | 2033951 | 98724857 ~ 98725197 (+) |
| G1132058 | NA | other | downstream | 2073053 | 98762440 ~ 98767257 (+) |
