Gene
RNA
| Item | Value |
|---|---|
| gene id | G1130604 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 96706678 ~ 96707052 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1286399 | False | 242 | lncRNA | 0.50 | 3 | 96706678 | 96707052 |
| TU1286400 | True | 147 | lncRNA | 0.48 | 3 | 96706678 | 96706937 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937804 | LOC106591169 | coding | upstream | 3953 | 96676774 ~ 96702725 (+) |
| LOC110494408 | NA | coding | upstream | 34053 | 96671465 ~ 96672625 (+) |
| LOC110494405 | pigq | coding | upstream | 36232 | 96637198 ~ 96670446 (+) |
| LOC110512418 | alg1 | coding | upstream | 73339 | 96618239 ~ 96633339 (+) |
| LOC118937803 | NA | coding | upstream | 76079 | 96627108 ~ 96630599 (+) |
| LOC110485332 | LOC105030590 | coding | downstream | 61339 | 96768391 ~ 96838680 (+) |
| LOC118937805 | LOC106601973 | coding | downstream | 162870 | 96869922 ~ 96872737 (+) |
| LOC118937806 | clec19a | coding | downstream | 347789 | 97054841 ~ 97069129 (+) |
| LOC110539044 | mrp1 | coding | downstream | 533006 | 97240058 ~ 97298946 (+) |
| LOC110539053 | LOC106601961 | coding | downstream | 811288 | 97518340 ~ 97526372 (+) |
| G1130598 | NA | non-coding | upstream | 15772 | 96690626 ~ 96690906 (+) |
| G1130594 | NA | non-coding | upstream | 22724 | 96682192 ~ 96683954 (+) |
| G1130589 | NA | non-coding | upstream | 50952 | 96654343 ~ 96655726 (+) |
| G1130611 | NA | non-coding | downstream | 20793 | 96727845 ~ 96728202 (+) |
| G1130629 | NA | non-coding | downstream | 72857 | 96779909 ~ 96865354 (+) |
| G1130641 | NA | non-coding | downstream | 127680 | 96834732 ~ 96835297 (+) |
| G1130642 | NA | non-coding | downstream | 135919 | 96842971 ~ 96845964 (+) |
| G1130655 | ar6p1 | non-coding | downstream | 163716 | 96870768 ~ 96897111 (+) |
| G1130570 | alg1 | other | upstream | 73226 | 96618256 ~ 96633452 (+) |
| LOC110538761 | LOC106606716 | other | upstream | 1076103 | 95629494 ~ 95815227 (+) |
| G1129772 | NA | other | upstream | 1187036 | 95519178 ~ 95519642 (+) |
| G1129613 | LOC106601744 | other | upstream | 1396981 | 95300784 ~ 95309697 (+) |
| G1130780 | LOC106606334 | other | downstream | 455210 | 97162262 ~ 97163079 (+) |
| G1131438 | NA | other | downstream | 1113672 | 97820724 ~ 97822057 (+) |
| LOC118936514 | smim22 | other | downstream | 1552957 | 98259570 ~ 98268855 (+) |
| G1132060 | NA | other | downstream | 2017805 | 98724857 ~ 98725197 (+) |
| G1132058 | NA | other | downstream | 2056907 | 98762440 ~ 98767257 (+) |
