G1130962


Basic Information

Item Value
gene id G1130962
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 96907611 ~ 96908372 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1286957
tgaccctTAGCTACAGCTGCTGcacagactggtgagtactgaccctTAGCTACAGCTCCACATGCTGGTGAGTACTGACCCTTAGCTACAGCTccacagactggtgagtactgaccctTAGCTACAGCTccacagactggtgagtactgaccctTAGCTACAGCTGCTGcacagactggtgagtactgaccctTAGCTACAGCTCCACATGCTGGTGAGTACTGACCCTTAGCTACAGCTccacagactggtgagtactgaccctTAGCTACAGCTGCTccacagactggtgagtactgaccccTAGCTACAGCTGCTGcacagactggtgagtactgaccctTAGCTACAGCTccacagactggtgagtactgaccctTAGCTACAGCTCCACATGCTGGTGAGTACTGACCCTTAGCTACAGCTccacagactggtgagtactgaccctTAGCTACAGCTccacagactggtgagtactgaccccTAGCTACAGCTGCTGcacagactggtgagtactgaccctTAGCTACAGCTccacagactggtgagtactgaccctTAGCTACAGCTccacagactggtgagtactgaccctTAGCTACTGCTccacagactggtgagtactgaccctTAGCTACAGCTCCACATGCTGGTGAGTACTGACCCTTAGCTACAGCTccacagact

Function

NR:

description
PREDICTED: uncharacterized protein LOC106562650 isoform X2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1286957 True 690 lncRNA 0.53 2 96907611 96908372

Neighbor

gene id symbol gene type direction distance location
LOC110487148 ar6p1 coding downstream 10421 96874784 ~ 96897190 (-)
LOC110487147 LOC106601974 coding downstream 40149 96858442 ~ 96867462 (-)
LOC110485334 LOC106596281 coding downstream 62426 96841611 ~ 96845185 (-)
LOC118937835 LOC106591170 coding downstream 154190 96728982 ~ 96753421 (-)
LOC110518479 LOC106591170 coding downstream 178680 96714290 ~ 96728931 (-)
LOC110515892 syt17 coding upstream 169739 97078111 ~ 97137134 (-)
LOC110538850 LOC106606334 coding upstream 243946 97152318 ~ 97158050 (-)
LOC118936515 LOC106606334 coding upstream 249646 97158018 ~ 97163137 (-)
LOC118937807 NA coding upstream 398207 97306579 ~ 97320822 (-)
LOC110539048 LOC106602018 coding upstream 439762 97348134 ~ 97355956 (-)
G1130905 NA non-coding downstream 175767 96730980 ~ 96731844 (-)
G1130897 NA non-coding downstream 195636 96711626 ~ 96711975 (-)
G1130893 NA non-coding downstream 202023 96701694 ~ 96705588 (-)
G1130885 NA non-coding downstream 218425 96685302 ~ 96689186 (-)
G1130967 NA non-coding upstream 15062 96923434 ~ 96923957 (-)
G1130970 NA non-coding upstream 32269 96940641 ~ 97020117 (-)
G1130973 NA non-coding upstream 70662 96979034 ~ 96980067 (-)
G1130974 NA non-coding upstream 79244 96987616 ~ 96988195 (-)
G1130977 NA non-coding upstream 89263 96997635 ~ 96997970 (-)
LOC110516715 LOC103469064 other downstream 472261 96392239 ~ 96435793 (-)
G1130145 NA other downstream 1061328 95845107 ~ 95846283 (-)
LOC110519445 smg1 other upstream 67803 96898792 ~ 97043408 (-)
G1131229 LOC106601922 other upstream 470176 97378548 ~ 97416568 (-)
G1131230 LOC106601922 other upstream 474728 97383100 ~ 97424120 (-)

Expression


Co-expression Network