G1131016


Basic Information

Item Value
gene id G1131016
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 97144019 ~ 97145512 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1287029
tatagtgaatggGGGGCCATGTGTGATGTATTTCCCTGGTTAAATCCagtacactatatagtgaatggggggccatgtgggatgtatttccctggttaaatacagtacactatatagtgaatggGGGGCCATGTGTGATGTATTTCCCTGGTTAAATCCagtacactatatagtgaatggGGGGCCATGTGTGATGTATTTCCCTGGTTAAATCCagtacactatatagtgaatggGGGGCCATGTGTGATGTATTTCCCTGGTTAAATCCagtacactatatagtgaatggGGGGCCATGTGTGATGTATTTCCCTGGTTAAATGCagtacactatatagtgaatggggggccatgtgggatgtatttccctggttaaatgcagtacactatatagtgaatggGGGGCCATGTGGGATATATTTCCCTGGTTAAATGCagtacactatatagtgaatggGGGGCCATGTGTGATGTATTTCCCTGGTTAAATGCagtacactatatagtgaatggGGGGCCATGTGTGATGTATTTCCCTGGTTAAATGCagtacactatatagtgaatggGGGGCCATGTGTGATGTATTTCCCTGGTTAAATCCagtacactatatagtgaatggGGGGCCATGTGTGATGTATTTCCCTGGTTAAATGCagtacactatatagtgaatggGGGGCCATGTGTGATGTATTTCCCTGGTTAAATGCagtacactatatagtgaatggGGGGCCATGTGTGATGTATTTCCCTGGTTAAATCCagtacactatatagtgaatggggggccatttgggatgtatttccctggttaaatgcagtacactatatagtgaatggGGGGCCATGTGTGACTCTCCCTGTCTACCGAACGTTTAGTCACGGGACTGGTGGCACGACGCTTCGTGTTTCAGAGGCTTAAAAAAGCAGAACGGAATCTAAAATACGGAACTTTACACAAGTCTTCCAGTCAAACTAAAATACCAAAGAAAGGAACATAAAAAACAGTCTCAGAAATGTGTTTTAAAGGGGCTGTTCATGCTAAAAACAGGTTATTTACATGTCTCAGAAATGTGTTTTAAAGGGGCTGTTCACGCTAAAAACAGGTTATTTACATGTCTCAGAAATGTGTTTTAAAGGGGCTGTTCACTCTAAAAACAGGTTATTTACATGTCTCAGAAATGTGTTTTAAAGGGACTGTTTCTCAGATGTTTTAATGTCTCAGAACATGTCATGTCTGATGTCAAGTAGAGTCAAAGATATTTAATATAGATTCTATATAAGGAGAATATGTATTAGGAGAAATCAAAGCCGAAATGGAGAAACATTGGTACTGTAAACTTaatttttttttagggtgaactatccctttaagatatGAATGTATGTGTATATGAAACTATCGTGTCTTTAAAGGTACAGTAGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1287029 True 1439 lncRNA 0.40 2 97144019 97145512

Neighbor

gene id symbol gene type direction distance location
LOC110515892 syt17 coding downstream 6885 97078111 ~ 97137134 (-)
LOC110519445 smg1 coding downstream 100611 96898792 ~ 97043408 (-)
LOC110487148 ar6p1 coding downstream 246829 96874784 ~ 96897190 (-)
LOC110487147 LOC106601974 coding downstream 276557 96858442 ~ 96867462 (-)
LOC110485334 LOC106596281 coding downstream 298834 96841611 ~ 96845185 (-)
LOC110538850 LOC106606334 coding upstream 6806 97152318 ~ 97158050 (-)
LOC118936515 LOC106606334 coding upstream 12506 97158018 ~ 97163137 (-)
LOC118937807 NA coding upstream 161067 97306579 ~ 97320822 (-)
LOC110539048 LOC106602018 coding upstream 202622 97348134 ~ 97355956 (-)
LOC110538791 LOC106601922 coding upstream 232827 97378339 ~ 97386199 (-)
G1131009 NA non-coding downstream 5099 97138689 ~ 97138920 (-)
G1131007 NA non-coding downstream 22541 97121180 ~ 97121478 (-)
G1131004 NA non-coding downstream 36806 97106800 ~ 97107213 (-)
G1131003 NA non-coding downstream 40934 97102370 ~ 97103085 (-)
G1131001 NA non-coding downstream 46709 97097111 ~ 97097310 (-)
G1131017 NA non-coding upstream 209 97145721 ~ 97146176 (-)
G1131021 NA non-coding upstream 14232 97159744 ~ 97160488 (-)
G1131041 NA non-coding upstream 43772 97189284 ~ 97189931 (-)
G1131043 NA non-coding upstream 45151 97190663 ~ 97191704 (-)
G1131047 NA non-coding upstream 58366 97203878 ~ 97204370 (-)
LOC110518479 LOC106591170 other downstream 428384 96714290 ~ 96728931 (-)
G1130893 NA other downstream 438431 96701694 ~ 96705588 (-)
G1131229 LOC106601922 other upstream 233036 97378548 ~ 97416568 (-)
G1131230 LOC106601922 other upstream 237588 97383100 ~ 97424120 (-)
G1131255 NA other upstream 284573 97430085 ~ 97433418 (-)
G1131270 NA other upstream 316301 97461813 ~ 97462271 (-)

Expression


Co-expression Network