G1131047


Basic Information

Item Value
gene id G1131047
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 97203878 ~ 97204370 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1287069
caataacaaaacaagaaagaaagagagggagggaggagaagagtggGGAGAGAACGAAAGGAAAGAAAGACGAGGGATGAAGAACGAGGGATGAAGAGAGATTTTGAGGGTTTTGAAGTGCAGGTTTAGAGTTTATTTTGGAGGATCCAGAGTGTTGTTTATCTCTGACCACAAACCAGaggtgaagaaagtagaggaatgTGAAAACAGCAGGGTGTCATAAAGACGTGTCTGTCTACCGGACCCAGCCGGAGAGGGGGTGTCGCAGACCGCCGAGGACAAGTCGTAGGGAACCAAAGCTGGGTCAGCTTCACTCTCCTGATTTGAGAAAGAGCTCAGAGCCCAGAAGTGGTGTCCCTGATATGAGAAAGAACCCAGAGCCCAGAAGTGGTGTCCCTGATATGAGAAAGAGCCCAGAGCCCAGAAGTGGTGTCCCTTGATATGAGAAAGAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1287069 True 454 lncRNA 0.49 2 97203878 97204370

Neighbor

gene id symbol gene type direction distance location
LOC118936515 LOC106606334 coding downstream 40741 97158018 ~ 97163137 (-)
LOC110538850 LOC106606334 coding downstream 45828 97152318 ~ 97158050 (-)
LOC110515892 syt17 coding downstream 66744 97078111 ~ 97137134 (-)
LOC110519445 smg1 coding downstream 160470 96898792 ~ 97043408 (-)
LOC110487148 ar6p1 coding downstream 306688 96874784 ~ 96897190 (-)
LOC118937807 NA coding upstream 102209 97306579 ~ 97320822 (-)
LOC110539048 LOC106602018 coding upstream 143764 97348134 ~ 97355956 (-)
LOC110538791 LOC106601922 coding upstream 173969 97378339 ~ 97386199 (-)
LOC110539046 LOC106596079 coding upstream 190258 97394628 ~ 97399459 (-)
LOC118937808 LOC106601922 coding upstream 210202 97414572 ~ 97424333 (-)
G1131043 NA non-coding downstream 12174 97190663 ~ 97191704 (-)
G1131041 NA non-coding downstream 13947 97189284 ~ 97189931 (-)
G1131021 NA non-coding downstream 43390 97159744 ~ 97160488 (-)
G1131017 NA non-coding downstream 57702 97145721 ~ 97146176 (-)
G1131016 NA non-coding downstream 58366 97144019 ~ 97145512 (-)
G1131083 NA non-coding upstream 82391 97286761 ~ 97290818 (-)
G1131208 NA non-coding upstream 104690 97309060 ~ 97353629 (-)
G1131211 NA non-coding upstream 105187 97309557 ~ 97396687 (-)
G1131205 NA non-coding upstream 110232 97314602 ~ 97319086 (-)
G1131228 LOC106601922 non-coding upstream 175864 97380234 ~ 97418609 (-)
LOC110487147 LOC106601974 other downstream 336455 96858442 ~ 96867462 (-)
LOC110518479 LOC106591170 other downstream 488243 96714290 ~ 96728931 (-)
G1131229 LOC106601922 other upstream 174178 97378548 ~ 97416568 (-)
G1131230 LOC106601922 other upstream 178730 97383100 ~ 97424120 (-)
G1131255 NA other upstream 225715 97430085 ~ 97433418 (-)
G1131270 NA other upstream 257443 97461813 ~ 97462271 (-)
LOC110538805 LOC106592410 other upstream 355303 97527207 ~ 97574077 (-)

Expression


Co-expression Network