G1131230 (LOC106601922)


Basic Information

Item Value
gene id G1131230
gene name LOC106601922
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 97383100 ~ 97424120 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1287312
TGTGCAGATCACACTGATAATCCTGAAGAAGATTAGCCGCAACGATCTCGCTGAGAAGCTAAACAGAGACTGTCCAATAGGTCCTTCAGATGAAGATGGTGAGAAGTTCCAACATGAATATAAACTGGAAGTAAAAAAGAAGTTTCAGCATGTTTTCAACGGGGTACCAAAGCAGGGCCATAAACGACTTCTCAATGagatctacacagagctctacatcacagagggtggaaGTGGAGAGGTCAATCAGGAACATGAGGTGAGACAGATCGAGATCATGTCCAAGAATCCAGCAAGACCAGAGGCTCAAATCCTCTGCAATGACATCTTCAAACAATCCTCTGGACAAGACAAACCtatcagaactgtgctgacaaagggagtcgctggcattggaaaaacagttTGTGTGCAGAAGTTCATTCTGGATTGGGCTGAAGGGAAAGCCAATCAGGATGTCCAATTCGTAATTTCACTCCCTTTTCGGGAGCTGAATTTGGTGAGGGGGGAAAAGTACAGTTTTGTAGAACTTCTACATAAATGTGTCTTAGAGACTAGAGTGATTGAGAGGGACTTTTTGAATCACATTTTAACAAAATTGCAAAAACCAGGAAACTGCAATGAAAGCAAGTACAAAGTTATATTTGTCcttgatggtctggatgagtgccGACTGACCCTCGACTACGAGACCGGTAAGAGCTGGTGTAATGTCACAGAGCCAACCTCAGTGGACGTGCTGCTGACAAACCTCATCAAGGGAaatctgcttccctctgctctcctctggataacCTCCAGACCTGCAGCAACCAATCACATCCCTCCTGAgtgtgttgaccaggtgacagaggtacgagggttcgatgacccacagaaggaggagtacttcaggaagacattcagtgatgaggacctggccaacagaatcatctcacacataaagacatcaaggagcctccacatcatgtgccacattccagtcttctgttggatctTAGCTGCAGTTCTGGAGCATGTGTTGAGT

Function

NR:

description
NACHT, LRR and PYD domains-containing protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1287312 True 1027 TUCP 0.46 3 97383100 97424120

Neighbor

gene id symbol gene type direction distance location
LOC110539048 LOC106602018 coding downstream 27144 97348134 ~ 97355956 (-)
LOC118937807 NA coding downstream 62278 97306579 ~ 97320822 (-)
LOC118936515 LOC106606334 coding downstream 219963 97158018 ~ 97163137 (-)
LOC110538850 LOC106606334 coding downstream 225050 97152318 ~ 97158050 (-)
LOC110515892 syt17 coding downstream 245966 97078111 ~ 97137134 (-)
LOC118937836 NA coding upstream 19865 97443985 ~ 97447215 (-)
LOC110538797 abcc1 coding upstream 26408 97450528 ~ 97509183 (-)
LOC110538805 LOC106592410 coding upstream 104018 97527207 ~ 97574077 (-)
LOC110539076 LOC106606268 coding upstream 196183 97620303 ~ 97715255 (-)
LOC110538885 LOC106602057 coding upstream 291618 97715738 ~ 97740971 (-)
G1131208 NA non-coding downstream 29471 97309060 ~ 97353629 (-)
G1131205 NA non-coding downstream 64014 97314602 ~ 97319086 (-)
G1131083 NA non-coding downstream 92282 97286761 ~ 97290818 (-)
G1131047 NA non-coding downstream 178730 97203878 ~ 97204370 (-)
G1131043 NA non-coding downstream 191396 97190663 ~ 97191704 (-)
G1131254 NA non-coding upstream 4711 97428831 ~ 97429199 (-)
G1131256 NA non-coding upstream 10237 97434357 ~ 97439794 (-)
G1131266 NA non-coding upstream 27644 97451764 ~ 97452113 (-)
G1131273 NA non-coding upstream 43896 97468016 ~ 97468635 (-)
G1131282 NA non-coding upstream 63570 97487690 ~ 97489374 (-)
LOC110519445 smg1 other downstream 401160 96898792 ~ 97043408 (-)
LOC110487147 LOC106601974 other downstream 515677 96858442 ~ 96867462 (-)
LOC110518479 LOC106591170 other downstream 667465 96714290 ~ 96728931 (-)
G1131255 NA other upstream 5965 97430085 ~ 97433418 (-)
G1131270 NA other upstream 37693 97461813 ~ 97462271 (-)
G1131656 NA other upstream 288514 97712634 ~ 97713116 (-)
LOC110538882 LOC106601977 other upstream 354535 97764189 ~ 97787224 (-)

Expression


Co-expression Network