G1131273



Basic Information


Item Value
gene id G1131273
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 97468016 ~ 97468635 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1287359
ACTCTGATATGAGGGTATGAGGTCACTGGTATGAGGTCACAAGGTCACTGATCTGAGGGTATGAGGTCACTCTGATCTGAGGGTATGAGGTCACTCTGATCTGAGGGTACGAGGTCACTCTGATATGAGGGTATGAGGTCACGAGGTCACTGATCTAAGGGTATGAGGTCACTGATCTGAGGGTTTGAGGTCACTCTGATCTGAGGGTATGAGGTCACTCTGATCTGAGGCTATGAGACAAGGGTGGTAGGCCATGTAAAAGCCGTGTAAAGATGGCCCTGCAGTATGGACACACAGACAGCCTGGCTCATGCATGTGTTTGCATGTCAGCTACACTACAGCAGCACTCAGAGAAAACACAGGTCCTCCTGGTCCAAGCCCATGTTGTTTTCAACTCTACAACCTGACACTTTGTTGTTGAGTTAATGAGTGATGATGAGTGGGTTCTGGGCTAGATGGCTGGGAGGAGGGCTGAT

Function


NR:

description
Ice nucleation protein

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1287359 True 476 lncRNA 0.50 2 97468016 97468635

Neighbor


gene id symbol gene type direction distance location
LOC118937836 NA coding downstream 20801 97443985 ~ 97447215 (-)
LOC118937808 LOC106601922 coding downstream 43683 97414572 ~ 97424333 (-)
LOC110539046 LOC106596079 coding downstream 68557 97394628 ~ 97399459 (-)
LOC110538791 LOC106601922 coding downstream 81817 97378339 ~ 97386199 (-)
LOC110539048 LOC106602018 coding downstream 112060 97348134 ~ 97355956 (-)
LOC110538805 LOC106592410 coding upstream 59503 97527207 ~ 97574077 (-)
LOC110539076 LOC106606268 coding upstream 151668 97620303 ~ 97715255 (-)
LOC110538885 LOC106602057 coding upstream 247103 97715738 ~ 97740971 (-)
LOC110538882 LOC106601977 coding upstream 295554 97764189 ~ 97787224 (-)
LOC110487093 LOC105031326 coding upstream 397019 97864865 ~ 97878576 (-)
G1131266 NA non-coding downstream 15903 97451764 ~ 97452113 (-)
G1131256 NA non-coding downstream 28222 97434357 ~ 97439794 (-)
G1131254 NA non-coding downstream 38817 97428831 ~ 97429199 (-)
G1131234 NA non-coding downstream 40813 97388883 ~ 97427203 (-)
G1131228 LOC106601922 non-coding downstream 49407 97380234 ~ 97418609 (-)
G1131282 NA non-coding upstream 19055 97487690 ~ 97489374 (-)
G1131283 NA non-coding upstream 23467 97492102 ~ 97492671 (-)
G1131290 NA non-coding upstream 46103 97514738 ~ 97515187 (-)
G1131291 NA non-coding upstream 47507 97516142 ~ 97516708 (-)
G1131292 NA non-coding upstream 51425 97520060 ~ 97520611 (-)
G1131270 NA other downstream 5745 97461813 ~ 97462271 (-)
G1131255 NA other downstream 34598 97430085 ~ 97433418 (-)
G1131230 LOC106601922 other downstream 43896 97383100 ~ 97424120 (-)
G1131229 LOC106601922 other downstream 51448 97378548 ~ 97416568 (-)
LOC118936515 LOC106606334 other downstream 304912 97158018 ~ 97163137 (-)
G1131656 NA other upstream 243999 97712634 ~ 97713116 (-)
G1131720 NA other upstream 384151 97852786 ~ 97853593 (-)
G1131666 NA other upstream 388964 97857599 ~ 97860518 (-)

Expression



Co-expression Network