G1131279


Basic Information

Item Value
gene id G1131279
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 97577288 ~ 97580856 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1287365
TAAGGATCATGTTGCTAGCCCGGTTTGGTATCTCGACCATTCAAACGTTATATGTTGACGATTATGTGATTTATAGCTAGATAGAGAACTTGGATGCAGATTGCAAGCGTGGCTCATTTTAACCTGTGCGCTTGGGTCATTTTGGTGAGGAAGCCTTGAAATCAGCACTACTGCAGGAGGAACCCGGGAGAGGCTGGAGAGACCCTGAACTGACACCCCAGCCCTGTCCCAAGCCTATAAATCAGCACTACTGCAGGAGGAACCTGGGAGAGGCTGGAGAGACCCTGAACTGACACGCCAGCCCTGTCCCAAGCCATCGTTGATCTTCCACGTCTCCATGTCCCAGGTGTAGGTTAAACCCTGAAGTCCCACCCCTGTGACATCCCTGGGTCCCCTCCCCAGCACCAGCATCCGCCCCTCTGACGACCTACCATGCCCCTGATCGTGGATGCTGTGTGGGCCGTGTGGAGCATCGGGGCCGGGGTCTATGACTACTTCCACACCAGTGCCATGGAGGAACGCATCGGCAACCTGGAGAGCGTCCTCACCATCCACCAGTGTGTCATAGCAGCTCTGTCCGCAGGCCTCGTCCTCCTCATGACCTACATACTGTGGAGAAAACACTGAAGCCATGGTTGTATTCAGTCAGTGAGATGGCACCGGGGGCAGGAGTttccccctaggtacagatcttgGATCATTTCCCCCTCCCTCAATCCTATCTGTAACCAGTAGTGGGGGAAAATACTAAACtcacccaagatcagcatctaggggcaacttcaccctactctaGCGGAGATGGGAGATGAGACGGTCCTAGATACTCCAGACCTAAGGACTGCATTACGGATAGCATCGGCTACTCACCAGACTAACAGCCAAATCACTCCCTAACCCTCCCCCATTGTCTTATGTCATATCATGCGATGACTGTCAGTTTAGGGGCGGGGCATCGTGTAGGAGTGACGCCACCTAGCATAAGATAAGGACCTTGGCACTAACCCTTGGGTGTTGGCAGATCTGAAGGGTCTTGATAGGTATAAGCAGTGTAACGCTGGATCATCACATTACTACTGGAGCTCAACAGACAGTCCTCAACCCCTCCCTAGTCCTTCCCCTCGGCCCTGACCCTCAAATGAACAGTCTGGATAGGTAATGACAACTGGGTAGGTATAGGATTCTGTTTCATCAAAGCACTACTATTGGAAGACGAGCTCAAGAGACCATGAGGAGTTGCTTGTGGACAGTAGCCCTGGTATATAGTGCAAAGGCTCTATCAGAGCTGGTTGGAGTAGAGTCATCCCTCCAGGTCTCGTTCGTCACTCTGCCGTTACTTGTGCAAAGGCTCTATCAGAGCTGGTTGGAGTAGAGTCATCCCTCCAGGTCTCGTTACTTGGAACGGGATTGAGAGGAAGTCTGGGAGCCGAGGGAAGCTGGAGAGGGGTTCTTCAATCTGAGAGCTCGAGTGCCGTGTTGACTGTAGCCTGGTCCCCAGATCGGTTTGTGCTATTGTGTCAACTCCTTGCCATGCCAAACATGGAATTGACATGATAGcgccaaacagatctgggacccgTCTATCATGACTGGCTGTGATCAGAAAACACTGTATTTTGCTACTGTGTGGATACTGACGTCTCTAGCCTGGTCcctgatctgtttgtgctgtcttgccaacaaTGACCATAAGGACCGTAGGCGTGGGCAAAACCATacaaacagatctaggaccaggctaactCAGGCCATCATCCATTGAATGTGATTGATTCATTTTGGTCCTGTTATATTGCCGAAAGGGATTTGTGAAACATGGCTTCTGTCCATGTCACTGTAGAATAAGCCAACATAATGATGACACTGTTGGGACTAAACATTATAAACCGCTTTTCTTAAAaaggtgtttatctttctctTACATGGACGATTTCAGACAGTTTAAGCCTAGTCCTTAGAATAAAAAGCCTGGTCAATGGAGAATCTCCGTTAAGttaatatatttttattatttttagcCCAGGACTAGACTTCAACTGTCTGAAATCTTCCATGTAagagaaagataaacacctttttttttttaaagttactgTCGAGGTTAAACATTGTTACACGTTTCCATGACGATGACACCTTTTAACGGTTTTCTCTGTATTTGTACTTCATAACATCTCCTTTTTAAAATCATGCTTTTATCATTGTTGGATCTGTTCCCTGTCTCCCTGGTTCACTATTATCATGTCTGTCGGCCATTGTTGGatctgttccctgtctctctggttCACTATTATCATGTCTGTCGGCCATTGTTGGATCTGTTCCCTGTCTACTTGGTTCACTATTATCATGTCTGTCGGCCATTGTTGGATCTGTTCCCTGTCTCCCTGGTTCACTATTATCATGTCTGTCGGCCATTGTTGGATCTGTTCCCTGTCTCCCTGGTTCACTATTATCATGTCTGTCGGCCATTGTTGGGTCTGTTCCCTGTCTCCCTGGTTCACTATTATCATGTCTGTCGGCCATTGTTGTCGACTGAAGTGCTACTGTGCGTATTTTGCTGAATCACTACCTGGTTGTTGGTTTCTATGTGAACAAACGGTATTCATGTCAGGTTTAATAAATAATGTGATTAAC
>TU1287366
TAAGGATCATGTTGCTAGCCCGGTTTGGTATCTCGACCATTCAAACGTTATATGTTGACGATTATGTGATTTATAGCTAGATAGAGAACTTGGATGCAGATTGCAAGCGTGGCTCATTTTAACCTGTGCGCTTGGGTCATTTTGGTGAGGAAGCCTTGAAATCAGCACTACTGCAGGAGGAACCCGGGAGAGGCTGGAGAGACCCTGAACTGACACCCCAGCCCTGTCCCAAGCCTATAAATCAGCACTACTGCAGGAGGAACCTGGGAGAGGCTGGAGAGACCCTGAACTGACACGCCAGCCCTGTCCCAAGCCATCGTTGATCTTCCACGTCTCCATGTCCCAGGTGTAGGTTAAACCCTGAAGTCCCACCCCTGTGACATCCCTGGGTCCCCTCCCCAGCACCAGCATCCGCCCCTCTGACGACCTACCATGCCCCTGATCGTGGATGCTGTGTGGGCCGTGTGGAGCATCGGGGCCGGGGTCTATGACTACTTCCACACCAGTGCCATGGAGGAACGCATCGGCAACCTGGAGAGCGTCCTCACCATCCACCAGTGTGTCATAGCAGCTCTGTCCGCAGGCCTCGTCCTCCTCATGACCTACATACTGTGGAGAAAACACTGAAGCCATGGTTGTATTCAGTCAGTGAGATGGCACCGGGGGCAGGAGTttccccctaggtacagatcttgGATCATTTCCCCCTCCCTCAATCCTATCTGTAACCAGTAGTGGGGGAAAATACTAAACtcacccaagatcagcatctaggggcaacttcaccctactctaGCGGAGATGGGAGATGAGACGGTCCTAGATACTCCAGACCTAAGGACTGCATTACGGATAGCATCGGCTACTCACCAGACTAACAGCCAAATCACTCCCTAACCCTCCCCCATTGTCTTATGTCATATCATGCGATGACTGTCAGTTTAGGGGCGGGGCATCGTGTAGGAGTGACGCCACCTAGCATAAGATAAGGACCTTGGCACTAACCCTTGGGTGTTGGCAGATCTGAAGGGTCTTGATAGGTATAAGCAGTGTAACGCTGGATCATCACATTACTACTGGAGCTCAACAGACAGTCCTCAACCCCTCCCTAGTCCTTCCCCTCGGCCCTGACCCTCAAATGAACAGTCTGGATAGGTAATGACAACTGGGTAGGTATAGGATTCTGTTTCATCAAAGCACTACTATTGGAAGACGAGCTCAAGAGACCATGAGGAGTTGCTTGTGGACAGTAGCCCTGGTATATAGTGCAAAGGCTCTATCAGAGCTGGTTGGAGTAGAGTCATCCCTCCAGGTCTCGTTACTTGGAACGGGATTGAGAGGAAGTCTGGGAGCCGAGGGAAGCTGGAGAGGGGTTCTTCAATCTGAGAGCTCGAGTGCCGTGTTGACTGTAGCCTGGTCCCCAGATCGGTTTGTGCTATTGTGTCAACTCCTTGCCATGCCAAACATGGAATTGACATGATAGcgccaaacagatctgggacccgTCTATCATGACTGGCTGTGATCAGAAAACACTGTATTTTGCTACTGTGTGGATACTGACGTCTCTAGCCTGGTCcctgatctgtttgtgctgtcttgccaacaaTGACCATAAGGACCGTAGGCGTGGGCAAAACCATacaaacagatctaggaccaggctaactCAGGCCATCATCCATTGAATGTGATTGATTCATTTTGGTCCTGTTATATTGCCGAAAGGGATTTGTGAAACATGGCTTCTGTCCATGTCACTGTAGAATAAGCCAACATAATGATGACACTGTTGGGACTAAACATTATAAACCGCTTTTCTTAAAaaggtgtttatctttctctTACATGGACGATTTCAGACAGTTTAAGCCTAGTCCTTAGAATAAAAAGCCTGGTCAATGGAGAATCTCCGTTAAGttaatatatttttattatttttagcCCAGGACTAGACTTCAACTGTCTGAAATCTTCCATGTAagagaaagataaacacctttttttttttaaagttactgTCGAGGTTAAACATTGTTACACGTTTCCATGACGATGACACCTTTTAACGGTTTTCTCTGTATTTGTACTTCATAACATCTCCTTTTTAAAATCATGCTTTTATCATTGTTGGATCTGTTCCCTGTCTCCCTGGTTCACTATTATCATGTCTGTCGGCCATTGTTGGatctgttccctgtctctTTGGTTCACTATTATCATGTCTGTCGGCCATTGTTGGATCTGTTCCCTGTCTCCCTGGTTCACTATTATCATGTCTGTCGGCCATTGTTGGATCTGTTCCCTGTCTCCCTGGTTCACTATTATCATGTCTGTCGGCCATTGTTGGGTCTGTTCCCTGTCTCCCTGGTTCACTATTATCATGTCTGTCGGCCATTGTTGTCGACTGAAGTGCTACTGTGCGTATTTTGCTGAATCACTACCTGGTTGTTGGTTTCTATGTGAACAAACGGTATTCATGTCAGGTTTAATAAATAATGTGATTAAC
>TU1287367
TAAGGATCATGTTGCTAGCCCGGTTTGGTATCTCGACCATTCAAACGTTATATGTTGACGATTATGTGATTTATAGCTAGATAGAGAACTTGGATGCAGATTGCAAGCGTGGCTCATTTTAACCTGTGCGCTTGGGTCATTTTGGTGAGGAAGCCTTGAAATCAGCACTACTGCAGGAGGAACCCGGGAGAGGCTGGAGAGACCCTGAACTGACACCCCAGCCCTGTCCCAAGCCTATAAATCAGCACTACTGCAGGAGGAACCTGGGAGAGGCTGGAGAGACCCTGAACTGACACGCCAGCCCTGTCCCAAGCCATCGTTGATCTTCCACGTCTCCATGTCCCAGGTGTAGGTTAAACCCTGAAGTCCCACCCCTGTGACATCCCTGGGTCCCCTCCCCAGCACCAGCATCCGCCCCTCTGACGACCTACCATGCCCCTGATCGTGGATGCTGTGTGGGCCGTGTGGAGCATCGGGGCCGGGGTCTATGACTACTTCCACACCAGTGCCATGGAGGAACGCATCGGCAACCTGGAGAGCGTCCTCACCATCCACCAGTGTGTCATAGCAGCTCTGTCCGCAGGCCTCGTCCTCCTCATGACCTACATACTGTGGAGAAAACACTGAAGCCATGGTTGTATTCAGTCAGTGAGATGGCACCGGGGGCAGGAGTttccccctaggtacagatcttgGATCATTTCCCCCTCCCTCAATCCTATCTGTAACCAGTAGTGGGGGAAAATACTAAACtcacccaagatcagcatctaggggcaacttcaccctactctaGCGGAGATGGGAGATGAGACGGTCCTAGATACTCCAGACCTAAGGACTGCATTACGGATAGCATCGGCTACTCACCAGACTAACAGCCAAATCACTCCCTAACCCTCCCCCATTGTCTTATGTCATATCATGCGATGACTGTCAGTTTAGGGGCGGGGCATCGTGTAGGAGTGACGCCACCTAGCATAAGATAAGGACCTTGGCACTAACCCTTGGGTGTTGGCAGATCTGAAGGGTCTTGATAGGTATAAGCAGTGTAACGCTGGATCATCACATTACTACTGGAGCTCAACAGACAGTCCTCAACCCCTCCCTAGTCCTTCCCCTCGGCCCTGACCCTCAAATGAACAGTCTGGATAGGTAATGACAACTGGGTAGGTATAGGATTCTGTTTCATCAAAGCACTACTATTGGAAGACGAGCTCAAGAGACCATGAGGAGTTGCTTGTGGACAGTAGCCCTGGTATATAGTGCAAAGGCTCTATCAGAGCTGGTTGGAGTAGAGTCATCCCTCCAGGTCTCGTTCGTCACTCTGCCGTTACTTGTGCAAAGGCTCTATCAGAGCTGGTTGGAGTAGAGTCATCCCTCCAGGTCTCGTTACTTGGAACGGGATTGAGAGGAAGTCTGGGAGCCGAGGGAAGCTGGAGAGGGGTTCTTCAATCTGAGAGCTCGAGTGCCGTGTTGACTGTAGCCTGGTCCCCAGATCGGTTTGTGCTATTGTGTCAACTCCTTGCCATGCCAAACATGGAATTGACATGATAGcgccaaacagatctgggacccgTCTATCATGACTGGCTGTGATCAGAAAACACTGTATTTTGCTACTGTGTGGATACTGACGTCTCTAGCCTGGTCcctgatctgtttgtgctgtcttgccaacaaTGACCATAAGGACCGTAGGCGTGGGCAAAACCATacaaacagatctaggaccaggctaactCAGGCCATCATCCATTGAATGTGATTGATTCATTTTGGTCCTGTTATATTGCCGAAAGGGATTTGTGAAACATGGCTTCTGTCCATGTCACTGTAGAATAAGCCAACATAATGATGACACTGTTGGGACTAAACATTATAAACCGCTTTTCTTAAAaaggtgtttatctttctctTACATGGACGATTTCAGACAGTTTAAGCCTAGTCCTTAGAATAAAAAGCCTGGTCAATGGAGAATCTCCGTTAAGttaatatatttttattatttttagcCCAGGACTAGACTTCAACTGTCTGAAATCTTCCATGTAagagaaagataaacacctttttttttttaaagttactgTCGAGGTTAAACATTGTTACACGTTTCCATGACGATGACACCTTTTAACGGTTTTCTCTGTATTTGTACTTCATAACATCTCCTTTTTAAAATCATGCTTTTATCATTGTTGGATCTGTTCCCTGTCTCCTTGGTTCACTATTATCATGTCTGTCGGCCATTGTTGGATCTGTTCCCTGTCTCCCTGGTTCACTATTATCATGTCTGTCGGCCATTGTTGGATCTGTTCCCTGTCTCCCTGGTTCACTATTATCATGTCTGTCGGCCATTGTTGGGTCTGTTCCCTGTCTCCCTGGTTCACTATTATCATGTCTGTCGGCCATTGTTGTCGACTGAAGTGCTACTGTGCGTATTTTGCTGAATCACTACCTGGTTGTTGGTTTCTATGTGAACAAACGGTATTCATGTCAGGTTTAATAAATAATGTGATTAAC

Function

NR:

description
hypothetical protein EH28_13966

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1287365 False 2637 lncRNA 0.48 2 97577288 97580856
TU1287366 False 2509 lncRNA 0.48 4 97577288 97580856
TU1287367 True 2529 lncRNA 0.48 3 97577288 97580856

Neighbor

gene id symbol gene type direction distance location
LOC110538805 LOC106592410 coding downstream 10835 97527207 ~ 97574077 (-)
LOC110538797 abcc1 coding downstream 68105 97450528 ~ 97509183 (-)
LOC118937836 NA coding downstream 130073 97443985 ~ 97447215 (-)
LOC118937808 LOC106601922 coding downstream 152955 97414572 ~ 97424333 (-)
LOC110539046 LOC106596079 coding downstream 177829 97394628 ~ 97399459 (-)
LOC110539076 LOC106606268 coding upstream 39447 97620303 ~ 97715255 (-)
LOC110538885 LOC106602057 coding upstream 134882 97715738 ~ 97740971 (-)
LOC110538882 LOC106601977 coding upstream 183333 97764189 ~ 97787224 (-)
LOC110487093 LOC105031326 coding upstream 284798 97864865 ~ 97878576 (-)
LOC110487090 LOC106606200 coding upstream 336881 97917737 ~ 97943871 (-)
G1131306 NA non-coding downstream 18972 97557985 ~ 97558316 (-)
G1131304 NA non-coding downstream 21792 97555079 ~ 97555496 (-)
G1131303 NA non-coding downstream 23056 97553567 ~ 97554232 (-)
G1131294 NA non-coding downstream 54293 97522624 ~ 97522995 (-)
G1131331 NA non-coding upstream 13699 97594555 ~ 97594939 (-)
G1131343 NA non-coding upstream 20076 97600932 ~ 97602014 (-)
G1131350 NA non-coding upstream 24673 97605529 ~ 97605744 (-)
G1131360 NA non-coding upstream 32674 97613530 ~ 97613768 (-)
G1131625 NA non-coding upstream 35108 97615964 ~ 97619180 (-)
G1131270 NA other downstream 115017 97461813 ~ 97462271 (-)
G1131255 NA other downstream 143870 97430085 ~ 97433418 (-)
G1131230 LOC106601922 other downstream 153168 97383100 ~ 97424120 (-)
G1131229 LOC106601922 other downstream 160720 97378548 ~ 97416568 (-)
G1131656 NA other upstream 131778 97712634 ~ 97713116 (-)
G1131720 NA other upstream 271930 97852786 ~ 97853593 (-)
G1131666 NA other upstream 276743 97857599 ~ 97860518 (-)
LOC110485313 LOC106535622 other upstream 378936 97959753 ~ 97974748 (-)

Expression


Co-expression Network