G1131628


Basic Information

Item Value
gene id G1131628
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 97630348 ~ 97632487 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1287901
cacacacacagtctctttgTAGTGGATACCTACTGTACCATATCATGCAACAGTACAGATTAGCTCTCACTGCCAGTGGTGTTTACGATCAAGcagatctcttctctctctgtctgtctgtcttcttccCTCCTTTTCTAGGCAATGAGATTTGTTATGGGCAGAGTTGTTACCATAGCAACTGCATCCCCGTTAGACACAGGCTGGGTTAAGTTGGGCAGAAGGGAaaggggggtgtgtgtgtctatggaggGGGTAGGATGTAATCTGCAGTGTATTCTGGAGAGGGATGAGGGCTTTCAGTAAAAGCTTGGTGTTCCCCAATGCTGTTGTCTGCTACTGCAGTTTCTATGGTTCAGGTGTTATTGGCCTGAGAAatggacatagaaatagacatagaagtggacatagaaatagacatagAAGTGGCCATAGAAATACAATTGATAGAATAGATGCCATTTTATCACCATGGTTAGTTTTGGGTAGTTTAGATGGCACCATTACTTAACACAGTGGTTGGTGTAGCTAGGATACTTCAGTCAAGTATTCTAAACCTGTCCTAACCCTGCTCCACCCTGACCCCGTTCACCAGCCAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1287901 True 601 lncRNA 0.45 2 97630348 97632487

Neighbor

gene id symbol gene type direction distance location
LOC110538805 LOC106592410 coding downstream 63895 97527207 ~ 97574077 (-)
LOC110538797 abcc1 coding downstream 121165 97450528 ~ 97509183 (-)
LOC118937836 NA coding downstream 183133 97443985 ~ 97447215 (-)
LOC118937808 LOC106601922 coding downstream 206015 97414572 ~ 97424333 (-)
LOC110539046 LOC106596079 coding downstream 230889 97394628 ~ 97399459 (-)
LOC110538885 LOC106602057 coding upstream 83251 97715738 ~ 97740971 (-)
LOC110538882 LOC106601977 coding upstream 131702 97764189 ~ 97787224 (-)
LOC110487093 LOC105031326 coding upstream 233167 97864865 ~ 97878576 (-)
LOC110487090 LOC106606200 coding upstream 285250 97917737 ~ 97943871 (-)
LOC110487083 tigd1 coding upstream 314791 97947278 ~ 97949231 (-)
G1131625 NA non-coding downstream 11168 97615964 ~ 97619180 (-)
G1131360 NA non-coding downstream 16580 97613530 ~ 97613768 (-)
G1131350 NA non-coding downstream 24604 97605529 ~ 97605744 (-)
G1131343 NA non-coding downstream 28334 97600932 ~ 97602014 (-)
G1131331 NA non-coding downstream 35409 97594555 ~ 97594939 (-)
G1131639 NA non-coding upstream 26053 97658540 ~ 97659374 (-)
G1131653 NA non-coding upstream 76301 97708788 ~ 97709521 (-)
G1131701 NA non-coding upstream 150678 97783165 ~ 97783375 (-)
G1131702 NA non-coding upstream 151956 97784443 ~ 97784734 (-)
G1131669 NA non-coding upstream 160386 97792873 ~ 97793378 (-)
G1131270 NA other downstream 168077 97461813 ~ 97462271 (-)
G1131255 NA other downstream 196930 97430085 ~ 97433418 (-)
G1131230 LOC106601922 other downstream 206228 97383100 ~ 97424120 (-)
G1131229 LOC106601922 other downstream 213780 97378548 ~ 97416568 (-)
G1131656 NA other upstream 80147 97712634 ~ 97713116 (-)
G1131720 NA other upstream 220299 97852786 ~ 97853593 (-)
G1131666 NA other upstream 225112 97857599 ~ 97860518 (-)
LOC110485313 LOC106535622 other upstream 327305 97959753 ~ 97974748 (-)

Expression


Co-expression Network