G1131440


Basic Information

Item Value
gene id G1131440
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 97831343 ~ 97831645 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1287589
ccatatacgtctcctccagctccaCTCTGGAAGACATGTATTCACTATGACAGATGCTAAAAGCACGTCTCCCCACACTTTAGCTTTAAGACTAAGAGACAAACgcaccagactgtgtgtgtgtgtgtgtgtgtgttgcgacACAGGGAGATTGCTGGAGCATGGAGAATATACTTGGCAtctcgtgtgtctgtgtgtgtgcttcgcctatgtctgtctctgtgaactagtgtctgtctgtagctgAGCTGGGTAAAGTGTAAAATGCTGATCACCAGTCTACTACTCTATTCTCTCTACTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1287589 True 303 lncRNA 0.47 1 97831343 97831645

Neighbor

gene id symbol gene type direction distance location
LOC118936512 LOC106602055 coding upstream 67325 97709710 ~ 97764938 (+)
trnat-cgu-4 NA coding upstream 249989 97581283 ~ 97581354 (+)
LOC110539053 LOC106601961 coding upstream 304971 97518340 ~ 97526372 (+)
LOC110539044 mrp1 coding upstream 532397 97240058 ~ 97298946 (+)
LOC118937806 clec19a coding upstream 762214 97054841 ~ 97069129 (+)
LOC118937810 dus1l coding downstream 62729 97894374 ~ 97915482 (+)
LOC118937811 LOC106606197 coding downstream 171952 98003597 ~ 98017170 (+)
LOC110487112 LOC106594630 coding downstream 190566 98022211 ~ 98059451 (+)
LOC110485325 LOC105012794 coding downstream 234019 98065664 ~ 98090718 (+)
LOC118937837 LOC106594247 coding downstream 269998 98101643 ~ 98122078 (+)
G1131439 NA non-coding upstream 7416 97823557 ~ 97823927 (+)
G1131437 NA non-coding upstream 10973 97819003 ~ 97820370 (+)
G1131435 NA non-coding upstream 20101 97810503 ~ 97811242 (+)
G1131434 NA non-coding upstream 22930 97807867 ~ 97808413 (+)
G1131433 NA non-coding upstream 27573 97802805 ~ 97803770 (+)
G1131441 NA non-coding downstream 2312 97833957 ~ 97836740 (+)
G1131442 NA non-coding downstream 6885 97838530 ~ 97839412 (+)
G1131443 NA non-coding downstream 10799 97842444 ~ 97843900 (+)
G1131444 NA non-coding downstream 22258 97853903 ~ 97854130 (+)
LOC118937809 LOC105031325 non-coding downstream 27556 97792828 ~ 97860629 (+)
G1131438 NA other upstream 9286 97820724 ~ 97822057 (+)
G1130780 LOC106606334 other upstream 668264 97162262 ~ 97163079 (+)
LOC118937804 LOC106591169 other upstream 1129406 96676774 ~ 96702725 (+)
G1130570 alg1 other upstream 1197891 96618256 ~ 96633452 (+)
LOC110538761 LOC106606716 other upstream 2200768 95629494 ~ 95815227 (+)
LOC118936514 smim22 other downstream 428364 98259570 ~ 98268855 (+)
G1132060 NA other downstream 893212 98724857 ~ 98725197 (+)
G1132058 NA other downstream 932314 98762440 ~ 98767257 (+)
G1132082 NA other downstream 950494 98782139 ~ 98783327 (+)
G1132093 NA other downstream 964113 98795758 ~ 98797512 (+)

Expression


Co-expression Network