G1131666


Basic Information

Item Value
gene id G1131666
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 97857599 ~ 97860518 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1287949
CAAGGACTTATTCATTTATTTACACAATTTTAAAATACACAAATACAGTGGCATTACAAATGATGAGCAAAACTGACGACAAGACTTCCCATGACTCAGTGAGTGATGCATTGTGGGAACCAACGCAAGGTTTCCGTAGTCCGTCCCCACGTAGATATGCAAACACAAAACAAGAaggaaataaaaagagagagaagggaaagacaTGACATACCCAGAGAGAAACGAGAGATCCCACGTAAAGAACTGTACTTAACACAAGTGTACCTTGATCGTCATTACCCACAATCCCACACTGAAGAGAATGAGGTGGGAGGTTCTTTTTTTTTGAGACCATCAGCCGGTCGGTTCGAGGGTTTAAAACTAACTTACCCAAAACTACAATGGAGTGAAgcattcaacccccccccccccccccccatacactaccttcatcatcatcatcatcatactaCACACAGTGGCTAATACAGAGCTGGAGGTagaacttaaccctaaccacagatctaggatcaggttatccaactaactcctaaccttaaccattaggaggAAAACAAATACATCTGATCCTGGAACTGCTACCAGCTCCTAATGCAGACATGATATTTCACCGTTGAGTACTAGGTACATCCTATATACATGACAACAGAAGACAGACGCACTAAACTAGTCTGGTCTCAGATCTGGTTGgactctcttgccaactccttgtcactcattATAATGCACTGAGTGATAAAGTTGACAAGTCAGCACAAACTGATCCAGGAACAGGCTACCACTAAACCCCCTTTATCCCAGACTACAGAAAAGGCCTACAACACCCTGAGGCAGTACTACACTGAATGATGTGACCAGTGGGTTGGCCCTCGTCCTGAACTAACCAATAGGACAACCAGAAGAGAGAGAAACGTAGCATTGGTCGATAGTCTCCTGTACATCCACCAAACCGAACTTTGCCCTCTGGCAATTATCAGATCACTTTTTTTCTCAGAAACGTAGTTTCATTAcggtaaaaacattttaaaatattgattgataacaaaataaaaaataaaaagtttgaGATTGTGGTGGATTGAAAGCATAGGTTGAAATAGGCATTTTAaagcagacccccccccccccccccaacacacatttAACTGACCAACAAGTTCACCAACAAAAATAACTGCTACATGAGTGTGGAGACGGGTGATTCACAGCTTTCAGCCCCAGGACACCAAcagcagaagaggaagaggaggctgaagAGAGACGAGGTGATGGAGAAACAGACTGACTAGCAGAGAAGACAtcagcaaccccccccccaccccaccccatcccatcACTATGGACAAACAACCAGTCCTTATTTaaaactgtcacacacacacacagtcactataAGCTTCAGAACAGTAGAGGATTTGCTTTCTCCCAGTCCCCTTTAAAAACAACAGAGAGGGACACGTCTCCAacagcaccctatcccctattcaGTCCACAAGCATGTAGCTCCACCCACATCGgctgaacacgtgtatgtgaccaatagaatggACCAGAGCCCagtagggagtagggtggtgtttGGGACCCTCTAAACAAACCCGCTGTCCAGTTGGAGAATAGTACTCTCTTTCTCGGCATTGCATTGTGGGGATTAAGAGAGTCTTTTGAGGACACGAAAATGGAACCCAGACCATCTCCCGCTGCACAAACAAGACCTCTCTCACATGACCTTCAGAGTTTCAATTAGGGGTTATTCATTCAATATGACTTCCATCGTCTCTCTTTAAAAACAGAAAACACACTTGACTTTTCACTTAAGACACGATTTATGATTGGCATGAGTCCGTTGATATTCGGCAACCGTGTAAAAacagcaacacacacagccaGTGTAGTCAGAACAGAACACTGCCAGTACAAACAACTTTTAATCAACTTCACCTAAAATACAAACAGAGGAAAAGTCAagtaaataaagtaaaaaaaaacaacaggaaAGAGAAACAAGCTGATGGTTTTTATCAGGACAGCAACTCTGGAGGAGAACTGTCTGGCTGGGAGGGGCATCTGGTCCATCAGAAGTGatggagtaggagagagaagtgatggaggaggagagagaagtgatggaggaggagagagaaggagagaagtgatggaggaggagagagggagagaagtgatggaggagagggagagaagtgatggagtaggagagagaaggagagaagtgaTGGAGGATGAGGTGTGTAAGGGGCGTTAAGCAGGTCTGTGTGCCCCATGTCAGTGTCCTCGCTGGGGTTCACAAAAGcagaggggtgggggggcagtGACTGTTCTGGGTGTGCCAGGGGCAACAaaatccctccttcccccctctcttgtttctcctcctcctcctccatccccgtctcatctcctcctcttccatccccgaTGAGCACGGCTGAACGCTCTctgagtcgtgtgtgtgtgtgtgtgtgtgagagagagagagagtgtgtgtgtgtgtgtgtgtgtgtgagagagtgtgtgtgtcatccaCCCTGTTACAACAGCATGAGCTTGTTACTTAGCAGAGATCAGCTGATGTCAAAGAGGCAGAGCATCAGTCTGTGTGTTTTGATTGgctggttggatggatggagttGCTAGCGGATGACGAGGTCCTTGTCCTGccttttgattggttgattgtgtAAGAGTCCAGGCATCTGATGGGTTGACTGGTTGTTTCAGTAAGCGTCCTCCAGGTATtgaagtgtgtgttggtgtgtggtatggtgtgtgtgttggtgtgtggtatggtgtgtgtgttggtgtgtggtatGGTTAGGGCCGTGCATGGTTTAACCCTCCAGGGTGGTGATGGGGGCAGAGGGACTCATCGAGGGGCTGCTGACTGGAGGCCACTGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1287949 True 2920 TUCP 0.47 1 97857599 97860518

Neighbor

gene id symbol gene type direction distance location
LOC110538882 LOC106601977 coding downstream 70375 97764189 ~ 97787224 (-)
LOC110538885 LOC106602057 coding downstream 116628 97715738 ~ 97740971 (-)
LOC110539076 LOC106606268 coding downstream 142344 97620303 ~ 97715255 (-)
LOC110538805 LOC106592410 coding downstream 291146 97527207 ~ 97574077 (-)
LOC110538797 abcc1 coding downstream 348416 97450528 ~ 97509183 (-)
LOC110487093 LOC105031326 coding upstream 5136 97864865 ~ 97878576 (-)
LOC110487090 LOC106606200 coding upstream 57219 97917737 ~ 97943871 (-)
LOC110487083 tigd1 coding upstream 86760 97947278 ~ 97949231 (-)
LOC110485313 LOC106535622 coding upstream 99235 97959753 ~ 97974748 (-)
LOC110518411 LOC106606198 coding upstream 119253 97979771 ~ 98001593 (-)
G1131724 NA non-coding downstream 864 97856529 ~ 97856735 (-)
G1131723 NA non-coding downstream 1695 97855448 ~ 97855904 (-)
G1131722 NA non-coding downstream 2795 97854552 ~ 97854804 (-)
G1131721 NA non-coding downstream 3803 97853597 ~ 97853796 (-)
G1131719 NA non-coding downstream 5380 97851756 ~ 97852219 (-)
G1131671 NA non-coding upstream 3211 97863729 ~ 97864327 (-)
G1131729 dus1l non-coding upstream 35069 97895587 ~ 97895824 (-)
G1131731 NA non-coding upstream 37153 97897671 ~ 97897963 (-)
G1131679 NA non-coding upstream 39269 97899787 ~ 97900341 (-)
G1131720 NA other downstream 4006 97852786 ~ 97853593 (-)
G1131656 NA other downstream 144483 97712634 ~ 97713116 (-)
G1131270 NA other downstream 395328 97461813 ~ 97462271 (-)
LOC118936513 cog1 other upstream 398364 98230363 ~ 98259687 (-)
G1131863 NA other upstream 522452 98382970 ~ 98383815 (-)
G1132328 NA other upstream 1146109 99006627 ~ 99010112 (-)
LOC118937838 LOC106606233 other upstream 1192986 99052890 ~ 99059256 (-)

Expression


Co-expression Network