G1131671


Basic Information

Item Value
gene id G1131671
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 97863729 ~ 97864327 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1287957
gtaataccctgtatatagcctccacattgactctgtaccgtaataccctgtatatagcctcactactgttattttattgttgctctttaattatttgttatttttctattttcttccttttttatttattaatttcttACTTCactttattttagtaaatactttcttcacACTTATTTCTCTTAAAACTgtattattggttaagggcttgtaagtcagcatttcactgtgaggtctactacacctgttgtattcgaagTATGTTAATCTGTTAATCAGTTAATCTGTTGGGAGCTACACAATGAAACTAAACACCTCGAAGAGTTGGAACTGAAAACACCACATAAACAACAAGCCACAATTTAAAGTCAAGGTTTATTGTTCTTGTCAGTGGCTCAGTATAGACGATATGTTTATAATCTTATTCAAGTTTAGATCCTTAAATATCTAATTGGAGTCAGTTctgattatttttgttgtttgtCACTTCGGTTACATCAGATAGTAGATGAGACATGAAGACTAACAGTACCTTAGAATATTTCCCAAACTCATTTTGGTTATCAGAGCACTTCCAAGCACGACTGTGTAGAACCATG

Function

NR:

description
ceramide synthase 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1287957 True 599 lncRNA 0.33 1 97863729 97864327

Neighbor

gene id symbol gene type direction distance location
LOC110538882 LOC106601977 coding downstream 76505 97764189 ~ 97787224 (-)
LOC110538885 LOC106602057 coding downstream 122758 97715738 ~ 97740971 (-)
LOC110539076 LOC106606268 coding downstream 148474 97620303 ~ 97715255 (-)
LOC110538805 LOC106592410 coding downstream 297276 97527207 ~ 97574077 (-)
LOC110538797 abcc1 coding downstream 354546 97450528 ~ 97509183 (-)
LOC110487093 LOC105031326 coding upstream 1327 97864865 ~ 97878576 (-)
LOC110487090 LOC106606200 coding upstream 53410 97917737 ~ 97943871 (-)
LOC110487083 tigd1 coding upstream 82951 97947278 ~ 97949231 (-)
LOC110485313 LOC106535622 coding upstream 95426 97959753 ~ 97974748 (-)
LOC110518411 LOC106606198 coding upstream 115444 97979771 ~ 98001593 (-)
G1131724 NA non-coding downstream 6994 97856529 ~ 97856735 (-)
G1131723 NA non-coding downstream 7825 97855448 ~ 97855904 (-)
G1131722 NA non-coding downstream 8925 97854552 ~ 97854804 (-)
G1131721 NA non-coding downstream 9933 97853597 ~ 97853796 (-)
G1131719 NA non-coding downstream 11510 97851756 ~ 97852219 (-)
G1131729 dus1l non-coding upstream 31260 97895587 ~ 97895824 (-)
G1131731 NA non-coding upstream 33344 97897671 ~ 97897963 (-)
G1131679 NA non-coding upstream 35460 97899787 ~ 97900341 (-)
G1131733 NA non-coding upstream 36640 97900967 ~ 97901198 (-)
G1131666 NA other downstream 3211 97857599 ~ 97860518 (-)
G1131720 NA other downstream 10136 97852786 ~ 97853593 (-)
G1131656 NA other downstream 150613 97712634 ~ 97713116 (-)
LOC118936513 cog1 other upstream 394555 98230363 ~ 98259687 (-)
G1131863 NA other upstream 518643 98382970 ~ 98383815 (-)
G1132328 NA other upstream 1142300 99006627 ~ 99010112 (-)
LOC118937838 LOC106606233 other upstream 1189177 99052890 ~ 99059256 (-)

Expression


Co-expression Network