Gene
RNA
| Item | Value |
|---|---|
| gene id | G1131729 |
| gene name | dus1l |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 97895587 ~ 97895824 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| dus1l | Predicted to enable tRNA dihydrouridine synthase activity. Predicted to act upstream of or within tRNA processing. Orthologous to human DUS1L (dihydrouridine synthase 1 like). |
| description |
|---|
| PREDICTED: tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1288024 | True | 238 | lncRNA | 0.60 | 1 | 97895587 | 97895824 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487093 | LOC105031326 | coding | downstream | 17011 | 97864865 ~ 97878576 (-) |
| LOC110538882 | LOC106601977 | coding | downstream | 108363 | 97764189 ~ 97787224 (-) |
| LOC110538885 | LOC106602057 | coding | downstream | 154616 | 97715738 ~ 97740971 (-) |
| LOC110539076 | LOC106606268 | coding | downstream | 180332 | 97620303 ~ 97715255 (-) |
| LOC110538805 | LOC106592410 | coding | downstream | 329134 | 97527207 ~ 97574077 (-) |
| LOC110487090 | LOC106606200 | coding | upstream | 21913 | 97917737 ~ 97943871 (-) |
| LOC110487083 | tigd1 | coding | upstream | 51454 | 97947278 ~ 97949231 (-) |
| LOC110485313 | LOC106535622 | coding | upstream | 63929 | 97959753 ~ 97974748 (-) |
| LOC110518411 | LOC106606198 | coding | upstream | 83947 | 97979771 ~ 98001593 (-) |
| LOC110485327 | LOC105012792 | coding | upstream | 241250 | 98137074 ~ 98186289 (-) |
| G1131671 | NA | non-coding | downstream | 31260 | 97863729 ~ 97864327 (-) |
| G1131724 | NA | non-coding | downstream | 38852 | 97856529 ~ 97856735 (-) |
| G1131723 | NA | non-coding | downstream | 39683 | 97855448 ~ 97855904 (-) |
| G1131722 | NA | non-coding | downstream | 40783 | 97854552 ~ 97854804 (-) |
| G1131731 | NA | non-coding | upstream | 1847 | 97897671 ~ 97897963 (-) |
| G1131679 | NA | non-coding | upstream | 3963 | 97899787 ~ 97900341 (-) |
| G1131733 | NA | non-coding | upstream | 5143 | 97900967 ~ 97901198 (-) |
| G1131734 | NA | non-coding | upstream | 8415 | 97904239 ~ 97904496 (-) |
| G1131735 | NA | non-coding | upstream | 12987 | 97908811 ~ 97909526 (-) |
| G1131666 | NA | other | downstream | 35069 | 97857599 ~ 97860518 (-) |
| G1131720 | NA | other | downstream | 41994 | 97852786 ~ 97853593 (-) |
| G1131656 | NA | other | downstream | 182471 | 97712634 ~ 97713116 (-) |
| LOC118936513 | cog1 | other | upstream | 363058 | 98230363 ~ 98259687 (-) |
| G1131863 | NA | other | upstream | 487146 | 98382970 ~ 98383815 (-) |
| G1132328 | NA | other | upstream | 1110803 | 99006627 ~ 99010112 (-) |
| LOC118937838 | LOC106606233 | other | upstream | 1157680 | 99052890 ~ 99059256 (-) |
