Gene
RNA
| Item | Value |
|---|---|
| gene id | G1131778 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 98065697 ~ 98097585 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1288114 | True | 390 | lncRNA | 0.42 | 2 | 98065697 | 98097585 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110518411 | LOC106606198 | coding | downstream | 64104 | 97979771 ~ 98001593 (-) |
| LOC110485313 | LOC106535622 | coding | downstream | 90949 | 97959753 ~ 97974748 (-) |
| LOC110487083 | tigd1 | coding | downstream | 116466 | 97947278 ~ 97949231 (-) |
| LOC110487090 | LOC106606200 | coding | downstream | 121826 | 97917737 ~ 97943871 (-) |
| LOC110487093 | LOC105031326 | coding | downstream | 187121 | 97864865 ~ 97878576 (-) |
| LOC110485327 | LOC105012792 | coding | upstream | 39489 | 98137074 ~ 98186289 (-) |
| LOC118936513 | cog1 | coding | upstream | 132778 | 98230363 ~ 98259687 (-) |
| LOC110487128 | rogdi | coding | upstream | 168470 | 98265920 ~ 98283153 (-) |
| LOC110517726 | glyr1 | coding | upstream | 185877 | 98283462 ~ 98316905 (-) |
| LOC110485331 | ppl | coding | upstream | 235546 | 98333131 ~ 98380912 (-) |
| G1131776 | NA | non-coding | downstream | 4617 | 98060794 ~ 98061080 (-) |
| G1131775 | NA | non-coding | downstream | 5063 | 98060378 ~ 98060634 (-) |
| G1131774 | NA | non-coding | downstream | 19500 | 98044975 ~ 98046197 (-) |
| G1131769 | NA | non-coding | downstream | 41456 | 98023868 ~ 98024241 (-) |
| G1131764 | NA | non-coding | downstream | 48469 | 98016279 ~ 98017228 (-) |
| G1131799 | NA | non-coding | upstream | 76560 | 98174145 ~ 98174408 (-) |
| G1131814 | LOC106592915 | non-coding | upstream | 91304 | 98188889 ~ 98211641 (-) |
| G1131815 | NA | non-coding | upstream | 109178 | 98206763 ~ 98207237 (-) |
| G1131828 | NA | non-coding | upstream | 115895 | 98213480 ~ 98215847 (-) |
| G1131666 | NA | other | downstream | 205179 | 97857599 ~ 97860518 (-) |
| G1131720 | NA | other | downstream | 212104 | 97852786 ~ 97853593 (-) |
| LOC110538882 | LOC106601977 | other | downstream | 282874 | 97764189 ~ 97787224 (-) |
| G1131656 | NA | other | downstream | 352581 | 97712634 ~ 97713116 (-) |
| G1131863 | NA | other | upstream | 285385 | 98382970 ~ 98383815 (-) |
| G1132328 | NA | other | upstream | 909042 | 99006627 ~ 99010112 (-) |
| LOC118937838 | LOC106606233 | other | upstream | 955919 | 99052890 ~ 99059256 (-) |
| LOC110538840 | LOC106601903 | other | upstream | 994131 | 99090621 ~ 99092245 (-) |
