Gene
RNA
| Item | Value |
|---|---|
| gene id | G1131518 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 98134151 ~ 98134350 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1287743 | True | 200 | lncRNA | 0.36 | 1 | 98134151 | 98134350 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937837 | LOC106594247 | coding | upstream | 12073 | 98101643 ~ 98122078 (+) |
| LOC110485325 | LOC105012794 | coding | upstream | 43778 | 98065664 ~ 98090718 (+) |
| LOC110487112 | LOC106594630 | coding | upstream | 74700 | 98022211 ~ 98059451 (+) |
| LOC118937811 | LOC106606197 | coding | upstream | 116981 | 98003597 ~ 98017170 (+) |
| LOC118937810 | dus1l | coding | upstream | 218669 | 97894374 ~ 97915482 (+) |
| LOC110516721 | LOC105012791 | coding | downstream | 53382 | 98187732 ~ 98218285 (+) |
| LOC118936514 | smim22 | coding | downstream | 125220 | 98259570 ~ 98268855 (+) |
| LOC110487124 | LOC105006040 | coding | downstream | 291410 | 98425760 ~ 98564239 (+) |
| LOC110516605 | LOC106592968 | coding | downstream | 841983 | 98976333 ~ 98977246 (+) |
| LOC110539183 | LOC106606365 | coding | downstream | 936646 | 99070996 ~ 99088300 (+) |
| G1131510 | NA | non-coding | upstream | 10103 | 98090990 ~ 98124048 (+) |
| G1131497 | NA | non-coding | upstream | 112742 | 98020808 ~ 98021409 (+) |
| G1131492 | NA | non-coding | upstream | 130764 | 98002002 ~ 98003387 (+) |
| G1131508 | NA | non-coding | downstream | 3573 | 98137923 ~ 98140321 (+) |
| G1131554 | NA | non-coding | downstream | 67467 | 98201817 ~ 98202540 (+) |
| G1131557 | NA | non-coding | downstream | 85403 | 98219753 ~ 98225599 (+) |
| G1131560 | NA | non-coding | downstream | 95791 | 98230141 ~ 98231090 (+) |
| G1131565 | cog1 | non-coding | downstream | 106398 | 98240748 ~ 98241565 (+) |
| G1131438 | NA | other | upstream | 312094 | 97820724 ~ 97822057 (+) |
| G1130780 | LOC106606334 | other | upstream | 971072 | 97162262 ~ 97163079 (+) |
| LOC118937804 | LOC106591169 | other | upstream | 1432214 | 96676774 ~ 96702725 (+) |
| G1130570 | alg1 | other | upstream | 1500699 | 96618256 ~ 96633452 (+) |
| LOC110538761 | LOC106606716 | other | upstream | 2503576 | 95629494 ~ 95815227 (+) |
| G1132060 | NA | other | downstream | 590507 | 98724857 ~ 98725197 (+) |
| G1132058 | NA | other | downstream | 629609 | 98762440 ~ 98767257 (+) |
| G1132082 | NA | other | downstream | 647789 | 98782139 ~ 98783327 (+) |
| G1132093 | NA | other | downstream | 661408 | 98795758 ~ 98797512 (+) |
