G1131508


Basic Information

Item Value
gene id G1131508
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 98137923 ~ 98140321 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1287721
TCCCTCTAGGATGAGCCTCCACAGGGTTTATAAGGCTGATCACAGTCTCTTCCCTCTAGGATGAGCCTCCACAGGGTTTATAAGGCTGATCAGTCTCTTCCCTCTAGGATGAGCCTCCACAGGGTTTATAAGGCTGATCACAGTCTCTTCCCTCTAGGATGAGCCTCCACAGGGTTTATAAGGCTGATCAGTCTCTTCCCTCTAGGATGAGCCTCCACAGGGTTTATAAGGCGGATCACTGTCTCTTCCCTCTAGGATGAGCCTCCGCAGGGTTTATAAGGCTGATCACAGTCTCTTCCCTCTAGGATGAGCCTCCACAGGGTTTATAAGGCTGATCAGTCTCTTCCCTCTAGGATGAGCCTCCACAGGGTTTATAAGGCTGATCACTTGCTTACactaagacagagagagggacagaaagaggggagaaaTAAAGGACTGGAAGAGGGGATGTAGCTGGCCGGCAAGTTGTTTAGACTACCAGCCTCTGATGGACagccgtccgtctgtctgtgtgtgtgttttaggacTTAGGCAAATTAACATCATTGCTCTAAATACACAAATAAGTGGTCCACAATGTATCCTGAGAATTAGCTCAGTAGTTTATCAACTGGTCAGTCCGGCCCAGTCTGTCCGGGCCAGTCTGTCCGGGCCAGtctgtctgagcgtgtgtgttcACACACCCTCTTCCTTTAACACTGTCCATCAGCAGGTGTAAATCAAACTTGTGTAAAAACCTTTCAAATATAACTTACAAAGACAATGTTTAGGTACATATATTCATAATAAATCTATGTGGGGAAAAAAGTCAAAAGTTCCAAACAGTAAGACCAGGATCAGGTCAGAAGAGTCTCTatgggcagggtgtgtgtgtgtgtatagctctGTTTGATAGGTAATCATCAGACAGTGGTAAAAGGCTTATTTGTGGAATCATTAAGGATTAGTTTTAGTACAGTGTTGTAAAGTCCCCCCACTCTTTAACTTCCCCCtcagcaacaacaacaagtaACAAGCTCTCCGCTGCAGTTGGTTCCACATCCAGATAGCGACACTGATTGGCTgtcagaatggggggggggggggggggggcacggtGATGTCATAATCAGGCTCTGAGGGAAAAGGAAGTGTAGAATCAAGCCAGTTCAGGGCAGGTGTGAGTGGGGGTGCATAGCGACAGGCTGACGCCAGTAAAACACAGTCATCATCATTTTGTTCTACAGCGTTTACCACTCCCGCTTCCCTGGTTGCCGTGGGTGACGACCTTTGACTCCTCCCTCCAACACAGAAAGGCCAGTTGACCCCTTCACCCTTGACCGCTAACCTCCAGCAGTGGTCTGGGCTTCTCAGACAGGTTACAAAGTGACAGAGTGAGACAGGAGAGTTAAGAGTGAACCAACAGAGTGAATATAGTAATatagaacaacagatttaggaCCAGCTTCCCCTCCCCATATCCTGTcattaaccattagtgggggaaaatTAAAAACTGACCCAGGATCAGAGTCTGAGGGCAACTTCATCCTACAGAACACATCAACATATCTACAGACTCTGGAATAGTCCATTACAGATAGGAGAGGGGTGTGTGAGGGGAGGGATTGGGAGAGCTCATTTACAGTGGTTTagaagaggggagggatagaACTGCCAGGTACAAGGCCATTAGAAGTGGTAACAGGGTTCAGTGGTCAAGGGTCATAGGTGACAGCCTGCACCAGAGGTGACTGGAGATCAGGGGTCTAGGTGAGGGCTCGCAGGGGTTAAAGGTCAAGGGCCAAAAGGTGACTTAAAAGGCAGTGACACAGTGTAACACAACAACTCTTCTGCTCTCTGTTCATCACCCTGCAATCATGGCAAGTCAGTGGGTCACGGTGAGGAGTCACGGGGGGGACGGGTGGGGGTTAAAGGCCAAAAGGTGACTTGAAAAAGGTCATAACCCCCCTGCGGTCACTGCAGCATGAGCTGCTTTAGGTTGTCGTGGAGGATGGTGTCCTTGACGTCTCGGAACACCAGGCGAATGTTCTCCGTGTTGATGGCTGTGGTGAAGTGGTGGTACAGGGGCTTCTGTGTCACGTCCCTCCTCTTCCCCCGGAAACAGTCCACTAGGAACCTCTGTACGTCGGCCAGGCTGTGTGGCTCCCCGGGGTACTCTGGGAAATAGTCCTTGATGGGGACCGAGCGCACCTTGTCCTCCAGAAGGTCCGTCTTGTTGAGGAACAGGATGATGGAGACGTTGGAGAAAACACGATTGTTGACGATCGTCTCGAAGATGTTGAGGGATTCGCTGAGACGGTTGGTTTGACGGTCCTCCATCaag

Function

NR:

description
PREDICTED: guanine nucleotide-binding protein subunit alpha-13-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1287721 True 2329 lncRNA 0.50 2 98137923 98140321

Neighbor

gene id symbol gene type direction distance location
LOC118937837 LOC106594247 coding upstream 15845 98101643 ~ 98122078 (+)
LOC110485325 LOC105012794 coding upstream 47550 98065664 ~ 98090718 (+)
LOC110487112 LOC106594630 coding upstream 78472 98022211 ~ 98059451 (+)
LOC118937811 LOC106606197 coding upstream 120753 98003597 ~ 98017170 (+)
LOC118937810 dus1l coding upstream 222441 97894374 ~ 97915482 (+)
LOC110516721 LOC105012791 coding downstream 47411 98187732 ~ 98218285 (+)
LOC118936514 smim22 coding downstream 119249 98259570 ~ 98268855 (+)
LOC110487124 LOC105006040 coding downstream 285439 98425760 ~ 98564239 (+)
LOC110516605 LOC106592968 coding downstream 836012 98976333 ~ 98977246 (+)
LOC110539183 LOC106606365 coding downstream 930675 99070996 ~ 99088300 (+)
G1131518 NA non-coding upstream 3573 98134151 ~ 98134350 (+)
G1131510 NA non-coding upstream 13875 98090990 ~ 98124048 (+)
G1131497 NA non-coding upstream 116514 98020808 ~ 98021409 (+)
G1131554 NA non-coding downstream 61496 98201817 ~ 98202540 (+)
G1131557 NA non-coding downstream 79432 98219753 ~ 98225599 (+)
G1131560 NA non-coding downstream 89820 98230141 ~ 98231090 (+)
G1131565 cog1 non-coding downstream 100427 98240748 ~ 98241565 (+)
G1131567 cog1 non-coding downstream 107776 98248097 ~ 98252334 (+)
G1131438 NA other upstream 315866 97820724 ~ 97822057 (+)
G1130780 LOC106606334 other upstream 974844 97162262 ~ 97163079 (+)
LOC118937804 LOC106591169 other upstream 1435986 96676774 ~ 96702725 (+)
G1130570 alg1 other upstream 1504471 96618256 ~ 96633452 (+)
LOC110538761 LOC106606716 other upstream 2507348 95629494 ~ 95815227 (+)
G1132060 NA other downstream 584536 98724857 ~ 98725197 (+)
G1132058 NA other downstream 623638 98762440 ~ 98767257 (+)
G1132082 NA other downstream 641818 98782139 ~ 98783327 (+)
G1132093 NA other downstream 655437 98795758 ~ 98797512 (+)

Expression


Co-expression Network