Gene
RNA
| Item | Value |
|---|---|
| gene id | G1131839 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 98292145 ~ 98296429 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1288207 | False | 203 | lncRNA | 0.48 | 2 | 98292145 | 98295483 |
| TU1288208 | True | 298 | lncRNA | 0.49 | 2 | 98295228 | 98296429 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487128 | rogdi | coding | downstream | 8992 | 98265920 ~ 98283153 (-) |
| LOC118936513 | cog1 | coding | downstream | 32501 | 98230363 ~ 98259687 (-) |
| LOC110485327 | LOC105012792 | coding | downstream | 105856 | 98137074 ~ 98186289 (-) |
| LOC110518411 | LOC106606198 | coding | downstream | 290552 | 97979771 ~ 98001593 (-) |
| LOC110485313 | LOC106535622 | coding | downstream | 317397 | 97959753 ~ 97974748 (-) |
| LOC110485331 | ppl | coding | upstream | 36702 | 98333131 ~ 98380912 (-) |
| LOC110487126 | LOC106602016 | coding | upstream | 269967 | 98566396 ~ 98571514 (-) |
| LOC110514497 | LOC106602019 | coding | upstream | 469676 | 98766105 ~ 98906443 (-) |
| LOC110539185 | hgs | coding | upstream | 685332 | 98981732 ~ 99019633 (-) |
| LOC110538838 | LOC105029615 | coding | upstream | 725529 | 99021958 ~ 99027957 (-) |
| LOC110517726 | glyr1 | non-coding | downstream | 6207 | 98283462 ~ 98316905 (-) |
| G1131838 | NA | non-coding | downstream | 11344 | 98280601 ~ 98280801 (-) |
| G1131828 | NA | non-coding | downstream | 76298 | 98213480 ~ 98215847 (-) |
| G1131814 | LOC106592915 | non-coding | downstream | 80504 | 98188889 ~ 98211641 (-) |
| G1131810 | NA | non-coding | upstream | 8728 | 98305157 ~ 98309208 (-) |
| G1131845 | NA | non-coding | upstream | 28099 | 98324528 ~ 98326951 (-) |
| G1131859 | NA | non-coding | upstream | 79513 | 98375942 ~ 98377319 (-) |
| G1131862 | NA | non-coding | upstream | 85659 | 98382088 ~ 98382693 (-) |
| G1131864 | NA | non-coding | upstream | 87779 | 98384208 ~ 98384409 (-) |
| G1131666 | NA | other | downstream | 431627 | 97857599 ~ 97860518 (-) |
| G1131720 | NA | other | downstream | 438552 | 97852786 ~ 97853593 (-) |
| LOC110538882 | LOC106601977 | other | downstream | 509322 | 97764189 ~ 97787224 (-) |
| G1131863 | NA | other | upstream | 86541 | 98382970 ~ 98383815 (-) |
| G1132328 | NA | other | upstream | 710198 | 99006627 ~ 99010112 (-) |
| LOC118937838 | LOC106606233 | other | upstream | 757075 | 99052890 ~ 99059256 (-) |
| LOC110538840 | LOC106601903 | other | upstream | 795287 | 99090621 ~ 99092245 (-) |
| G1132564 | NA | other | upstream | 869519 | 99165948 ~ 99166607 (-) |
