G1131611


Basic Information

Item Value
gene id G1131611
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 98354785 ~ 98355764 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1287867
CTCACGTCCAGGTCTCTGATGAGGCTCTCCATCTGGTACATGTCCTTGAACTCTGGTTTGTACTTCTGGTCCACCTCTTTGTCCATTCTCTTCAGAAGGTCCTGGGTGTCCCGGGCCTCTTTGTGGAACTGGAGAGAAAACAGACACCGGCAGGAAAAACACTGAGGTAACAACATCACCGAAAGCAGCTACGGTTTATTTACACGAAGTTCGACCGGCAGCCAGTCGGTCTCTGCCTGAACCAACTCTGTTTACGTACCACGACAAGTCTGTAACTCAGAAGCTGTTGCTTTGCACAACACATGCTGGTACACAAGCCTGTCAACATCTAATGACCCTGTTCAAACATTCAGGATATCTTCAACTGATGCTTTCTGAATACTTGTTGCTGTGACTCACCTTGTGGTATTCGTCCATGTGTTTCAGGTGGtatcagggttaaggtcaggtcaGGTTATAGTATACTAATCACCTTGTGGTATTCGTCCATGTGTTTCAGGTGGtatcagggttaaggtcaggtcaGGTTATAGTATACTAATCACCTTGTGGTATTCGTCCATGTGTTTCAGGTGGtatcagggttaaggtcaggtcaggtcagggtaTAGTATACTAATCACCTTGTGGTATTCGTCCATGTGTTTCAGGTGGtatcagggttaaggtcaggtcaGGTTATAGTATACTAATCACCTTGTGGTATTCGTCCATGTGTTTCAGGTGGTTCTCCTCACAGATGAGCAGGTTCAGGTACTCCTTCCAGTCTGCATGCACAGCCTCCATATGAGCCTGACAGGTGGAGTCGAGTTCCGTTACATCACTGTCTGTTTG
>TU1287868
CTCACGTCCAGGTCTCTGATGAGGCTCTCCATCTGGTACATGTCCTTGAACTCTGGTTTGTACTTCTGGTCCACCTCTTTGTCCATTCTCTTCAGAAGGTCCTGGGTGTCCCGGGCCTCTTTGTGGAACTGGAGAGAAAACAGACACCGGCAGGAAAAACACTGAGGTAACAACATCACCGAAAGCAGCTACGGTTTATTTACACGAAGTTCGACCGGCAGCCAGTCGGTCTCTGCCTGAACCAACTCTGTTTACGTACCACGACAAGTCTGTAACTCAGAAGCTGTTGCTTTGCACAACACATGCTGGTACACAAGCCTGTCAACATCTAATGACCCTGTTCAAACATTCAGGATATCTTCAACTGATGCTTTCTGAATACTTGTTGCTGTGACTCACCTTGTGGTATTCGTCCATGTGTTTCAGGTGGtatcagggttaaggtcaggtcaGGTTATAGTATACTAATCACCTTGTGGTATTCGTCCATGTGTTTCAGGTGGtatcagggttaaggtcaggtcaggtcagggtaTAGTATACTAATCACCTTGTGGTATTCGTCCATGTGTTTCAGGTGGtatcagggttaaggtcaggtcaGGTTATAGTATACTAATCACCTTGTGGTATTCGTCCATGTGTTTCAGGTGGTTCTCCTCACAGATGAGCAGGTTCAGGTACTCCTTCCAGTCTGCATGCACAGCCTCCATATGAGCCTGACAGGTGGAGTCGAGTTCCGTTACATCACTGTCTGTTTG

Function

NR:

description
PREDICTED: periplakin-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1287867 False 834 lncRNA 0.47 3 98354785 98355764
TU1287868 True 761 lncRNA 0.47 3 98354785 98355764

Neighbor

gene id symbol gene type direction distance location
LOC118936514 smim22 coding upstream 88758 98259570 ~ 98268855 (+)
LOC110516721 LOC105012791 coding upstream 136500 98187732 ~ 98218285 (+)
LOC118937837 LOC106594247 coding upstream 232707 98101643 ~ 98122078 (+)
LOC110485325 LOC105012794 coding upstream 264412 98065664 ~ 98090718 (+)
LOC110487112 LOC106594630 coding upstream 295334 98022211 ~ 98059451 (+)
LOC110487124 LOC105006040 coding downstream 69996 98425760 ~ 98564239 (+)
LOC110516605 LOC106592968 coding downstream 620569 98976333 ~ 98977246 (+)
LOC110539183 LOC106606365 coding downstream 715232 99070996 ~ 99088300 (+)
epn3a LOC105006167 coding downstream 761637 99117401 ~ 99175955 (+)
LOC110538843 LOC106601911 coding downstream 827353 99183117 ~ 99188055 (+)
G1131605 NA non-coding upstream 10381 98342901 ~ 98344404 (+)
G1131601 NA non-coding upstream 13224 98340202 ~ 98341561 (+)
G1131598 NA non-coding upstream 21773 98332455 ~ 98333012 (+)
G1131592 NA non-coding upstream 34599 98319875 ~ 98320186 (+)
G1131543 NA non-coding upstream 65297 98286763 ~ 98289488 (+)
G1131612 NA non-coding downstream 298 98356062 ~ 98357553 (+)
G1131613 NA non-coding downstream 2128 98357892 ~ 98358483 (+)
G1131615 NA non-coding downstream 5173 98360937 ~ 98362527 (+)
G1131616 NA non-coding downstream 6824 98362588 ~ 98362911 (+)
G1131621 NA non-coding downstream 13221 98368985 ~ 98370163 (+)
G1131438 NA other upstream 532728 97820724 ~ 97822057 (+)
G1130780 LOC106606334 other upstream 1191706 97162262 ~ 97163079 (+)
LOC118937804 LOC106591169 other upstream 1652848 96676774 ~ 96702725 (+)
G1130570 alg1 other upstream 1721333 96618256 ~ 96633452 (+)
G1132060 NA other downstream 369093 98724857 ~ 98725197 (+)
G1132058 NA other downstream 408195 98762440 ~ 98767257 (+)
G1132082 NA other downstream 426375 98782139 ~ 98783327 (+)
G1132093 NA other downstream 439994 98795758 ~ 98797512 (+)
G1132174 NA other downstream 618679 98974443 ~ 98974926 (+)

Expression


Co-expression Network