Gene
RNA
| Item | Value |
|---|---|
| gene id | G1131615 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 98360937 ~ 98362527 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| periplakin |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1287873 | False | 266 | lncRNA | 0.52 | 3 | 98360937 | 98362527 |
| TU1287872 | True | 272 | lncRNA | 0.49 | 2 | 98361562 | 98362527 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936514 | smim22 | coding | upstream | 94910 | 98259570 ~ 98268855 (+) |
| LOC110516721 | LOC105012791 | coding | upstream | 142652 | 98187732 ~ 98218285 (+) |
| LOC118937837 | LOC106594247 | coding | upstream | 238859 | 98101643 ~ 98122078 (+) |
| LOC110485325 | LOC105012794 | coding | upstream | 270564 | 98065664 ~ 98090718 (+) |
| LOC110487112 | LOC106594630 | coding | upstream | 301486 | 98022211 ~ 98059451 (+) |
| LOC110487124 | LOC105006040 | coding | downstream | 63233 | 98425760 ~ 98564239 (+) |
| LOC110516605 | LOC106592968 | coding | downstream | 613806 | 98976333 ~ 98977246 (+) |
| LOC110539183 | LOC106606365 | coding | downstream | 708469 | 99070996 ~ 99088300 (+) |
| epn3a | LOC105006167 | coding | downstream | 754874 | 99117401 ~ 99175955 (+) |
| LOC110538843 | LOC106601911 | coding | downstream | 820590 | 99183117 ~ 99188055 (+) |
| G1131613 | NA | non-coding | upstream | 2454 | 98357892 ~ 98358483 (+) |
| G1131612 | NA | non-coding | upstream | 3384 | 98356062 ~ 98357553 (+) |
| G1131611 | NA | non-coding | upstream | 5173 | 98354785 ~ 98355764 (+) |
| G1131605 | NA | non-coding | upstream | 16533 | 98342901 ~ 98344404 (+) |
| G1131601 | NA | non-coding | upstream | 19376 | 98340202 ~ 98341561 (+) |
| G1131616 | NA | non-coding | downstream | 61 | 98362588 ~ 98362911 (+) |
| G1131621 | NA | non-coding | downstream | 6458 | 98368985 ~ 98370163 (+) |
| G1131865 | NA | non-coding | downstream | 32964 | 98395491 ~ 98396091 (+) |
| G1131868 | NA | non-coding | downstream | 39521 | 98402048 ~ 98402291 (+) |
| G1131869 | NA | non-coding | downstream | 42283 | 98404810 ~ 98405033 (+) |
| G1131438 | NA | other | upstream | 538880 | 97820724 ~ 97822057 (+) |
| G1130780 | LOC106606334 | other | upstream | 1197858 | 97162262 ~ 97163079 (+) |
| LOC118937804 | LOC106591169 | other | upstream | 1659000 | 96676774 ~ 96702725 (+) |
| G1130570 | alg1 | other | upstream | 1727485 | 96618256 ~ 96633452 (+) |
| G1132060 | NA | other | downstream | 362330 | 98724857 ~ 98725197 (+) |
| G1132058 | NA | other | downstream | 401432 | 98762440 ~ 98767257 (+) |
| G1132082 | NA | other | downstream | 419612 | 98782139 ~ 98783327 (+) |
| G1132093 | NA | other | downstream | 433231 | 98795758 ~ 98797512 (+) |
| G1132174 | NA | other | downstream | 611916 | 98974443 ~ 98974926 (+) |
