G1131621


Basic Information

Item Value
gene id G1131621
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 98368985 ~ 98370163 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1287879
tgtcacatgcgccgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacagatgtaggtagacctcacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtaggtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgagatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgagatgctgaatacaacaggtgtaggtagacctcacagtgaaatgctgaatacaacaggtgtaggtagacctcacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtaggtagacctcacagtgaaatgctgaatacaacaggtgtaggtagacctcacagtgaaatgctgaatacaacaggtgtagtagacctgacagtgaaatgctgaatacaacaggtgtaggtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgatgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtg
>TU1287882
tgtcacatgcgccgaatacaacaggtgtaggtagacctcacagtgaaatgctgaatacaacagatgtaggtagacctcacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtaggtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgagatgctgaatacaacaggtgtagtagaccttacagtgagatgctgaatacaacaggtgtaggtagacctcacagtgaaatgctgaatacaacaggtgtaggtagacctcacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtaggtagacctcacagtgaaatgctgaatacaacaggtgtaggtagacctcacagtgaaatgctgaatacaacaggtgtagtagacctgacagtgaaatgctgaatacaacaggtgtaggtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgatgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106595595

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1287879 False 1140 lncRNA 0.41 2 98368985 98370163
TU1287882 True 724 lncRNA 0.42 3 98368985 98370163

Neighbor

gene id symbol gene type direction distance location
LOC118936514 smim22 coding upstream 102958 98259570 ~ 98268855 (+)
LOC110516721 LOC105012791 coding upstream 150700 98187732 ~ 98218285 (+)
LOC118937837 LOC106594247 coding upstream 246907 98101643 ~ 98122078 (+)
LOC110485325 LOC105012794 coding upstream 278612 98065664 ~ 98090718 (+)
LOC110487112 LOC106594630 coding upstream 309534 98022211 ~ 98059451 (+)
LOC110487124 LOC105006040 coding downstream 55597 98425760 ~ 98564239 (+)
LOC110516605 LOC106592968 coding downstream 606170 98976333 ~ 98977246 (+)
LOC110539183 LOC106606365 coding downstream 700833 99070996 ~ 99088300 (+)
epn3a LOC105006167 coding downstream 747238 99117401 ~ 99175955 (+)
LOC110538843 LOC106601911 coding downstream 812954 99183117 ~ 99188055 (+)
G1131616 NA non-coding upstream 6074 98362588 ~ 98362911 (+)
G1131615 NA non-coding upstream 6458 98360937 ~ 98362527 (+)
G1131613 NA non-coding upstream 10502 98357892 ~ 98358483 (+)
G1131612 NA non-coding upstream 11432 98356062 ~ 98357553 (+)
G1131611 NA non-coding upstream 13221 98354785 ~ 98355764 (+)
G1131865 NA non-coding downstream 25328 98395491 ~ 98396091 (+)
G1131868 NA non-coding downstream 31885 98402048 ~ 98402291 (+)
G1131869 NA non-coding downstream 34647 98404810 ~ 98405033 (+)
G1131877 NA non-coding downstream 46057 98416220 ~ 98416756 (+)
G1131438 NA other upstream 546928 97820724 ~ 97822057 (+)
G1130780 LOC106606334 other upstream 1205906 97162262 ~ 97163079 (+)
LOC118937804 LOC106591169 other upstream 1667048 96676774 ~ 96702725 (+)
G1130570 alg1 other upstream 1735533 96618256 ~ 96633452 (+)
G1132060 NA other downstream 354694 98724857 ~ 98725197 (+)
G1132058 NA other downstream 393796 98762440 ~ 98767257 (+)
G1132082 NA other downstream 411976 98782139 ~ 98783327 (+)
G1132093 NA other downstream 425595 98795758 ~ 98797512 (+)
G1132174 NA other downstream 604280 98974443 ~ 98974926 (+)

Expression


Co-expression Network