G1131869


Basic Information

Item Value
gene id G1131869
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 98404810 ~ 98405033 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1288242
ACATGGTATCCTACCTGGGTACATACCCGGGATCCTACCTGGGTACATACCTGGGATCCTACCTGGGTACATACCCGGGATCCTACCTGGGATCCTACCTGGGTACATACCTGGGATCCTACCTGGGATCCtacctggttgaccggggtgtCAGCGGTGGAAGTCTCCGATGAgggctgggtccaggatgtctctagcgggaacccagcacctctcctccggac

Function

NR:

description
protein phosphatase 1 regulatory subunit 12B-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1288242 True 224 lncRNA 0.59 1 98404810 98405033

Neighbor

gene id symbol gene type direction distance location
LOC118936514 smim22 coding upstream 138783 98259570 ~ 98268855 (+)
LOC110516721 LOC105012791 coding upstream 186525 98187732 ~ 98218285 (+)
LOC118937837 LOC106594247 coding upstream 282732 98101643 ~ 98122078 (+)
LOC110485325 LOC105012794 coding upstream 314437 98065664 ~ 98090718 (+)
LOC110487112 LOC106594630 coding upstream 345359 98022211 ~ 98059451 (+)
LOC110487124 LOC105006040 coding downstream 20727 98425760 ~ 98564239 (+)
LOC110516605 LOC106592968 coding downstream 571300 98976333 ~ 98977246 (+)
LOC110539183 LOC106606365 coding downstream 665963 99070996 ~ 99088300 (+)
epn3a LOC105006167 coding downstream 712368 99117401 ~ 99175955 (+)
LOC110538843 LOC106601911 coding downstream 778084 99183117 ~ 99188055 (+)
G1131868 NA non-coding upstream 2519 98402048 ~ 98402291 (+)
G1131865 NA non-coding upstream 8719 98395491 ~ 98396091 (+)
G1131621 NA non-coding upstream 34647 98368985 ~ 98370163 (+)
G1131616 NA non-coding upstream 41899 98362588 ~ 98362911 (+)
G1131615 NA non-coding upstream 42283 98360937 ~ 98362527 (+)
G1131877 NA non-coding downstream 11187 98416220 ~ 98416756 (+)
G1131889 NA non-coding downstream 55396 98460429 ~ 98462432 (+)
G1131898 NA non-coding downstream 76835 98481868 ~ 98483223 (+)
G1131900 NA non-coding downstream 83981 98489014 ~ 98489787 (+)
G1131438 NA other upstream 582753 97820724 ~ 97822057 (+)
G1130780 LOC106606334 other upstream 1241731 97162262 ~ 97163079 (+)
LOC118937804 LOC106591169 other upstream 1702873 96676774 ~ 96702725 (+)
G1130570 alg1 other upstream 1771358 96618256 ~ 96633452 (+)
G1132060 NA other downstream 319824 98724857 ~ 98725197 (+)
G1132058 NA other downstream 358926 98762440 ~ 98767257 (+)
G1132082 NA other downstream 377106 98782139 ~ 98783327 (+)
G1132093 NA other downstream 390725 98795758 ~ 98797512 (+)
G1132174 NA other downstream 569410 98974443 ~ 98974926 (+)

Expression


Co-expression Network