G1131900


Basic Information

Item Value
gene id G1131900
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 98489014 ~ 98489787 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1288297
cccatagccaggtattaaccatctatagacccatctatagacctatagtcaggtattaaccatctatagacccatctatagacccatctatagacgcatctatagacccatagccaggtattaaccatctatagacccatagccagttattaaccatctatagacccatctatagacccatagtcaggtattaaccatctatagacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1288297 True 207 lncRNA 0.40 2 98489014 98489787

Neighbor

gene id symbol gene type direction distance location
LOC118936514 smim22 coding upstream 222987 98259570 ~ 98268855 (+)
LOC110516721 LOC105012791 coding upstream 270729 98187732 ~ 98218285 (+)
LOC118937837 LOC106594247 coding upstream 366936 98101643 ~ 98122078 (+)
LOC110485325 LOC105012794 coding upstream 398641 98065664 ~ 98090718 (+)
LOC110487112 LOC106594630 coding upstream 429563 98022211 ~ 98059451 (+)
LOC110516605 LOC106592968 coding downstream 486546 98976333 ~ 98977246 (+)
LOC110539183 LOC106606365 coding downstream 581209 99070996 ~ 99088300 (+)
epn3a LOC105006167 coding downstream 627614 99117401 ~ 99175955 (+)
LOC110538843 LOC106601911 coding downstream 693330 99183117 ~ 99188055 (+)
LOC110538844 tbcd coding downstream 699098 99188885 ~ 99322871 (+)
G1131898 NA non-coding upstream 5791 98481868 ~ 98483223 (+)
G1131889 NA non-coding upstream 26582 98460429 ~ 98462432 (+)
LOC110487124 LOC105006040 non-coding upstream 60564 98425760 ~ 98564239 (+)
G1131877 NA non-coding upstream 72258 98416220 ~ 98416756 (+)
G1131869 NA non-coding upstream 83981 98404810 ~ 98405033 (+)
G1131901 NA non-coding downstream 125 98489912 ~ 98490274 (+)
G1131917 NA non-coding downstream 60986 98550773 ~ 98551130 (+)
G1131918 NA non-coding downstream 62000 98551787 ~ 98552061 (+)
G1131919 NA non-coding downstream 69250 98559037 ~ 98559574 (+)
G1131920 NA non-coding downstream 70220 98560007 ~ 98560315 (+)
G1131438 NA other upstream 666957 97820724 ~ 97822057 (+)
G1130780 LOC106606334 other upstream 1325935 97162262 ~ 97163079 (+)
LOC118937804 LOC106591169 other upstream 1787077 96676774 ~ 96702725 (+)
G1130570 alg1 other upstream 1855562 96618256 ~ 96633452 (+)
G1132060 NA other downstream 235070 98724857 ~ 98725197 (+)
G1132058 NA other downstream 274172 98762440 ~ 98767257 (+)
G1132082 NA other downstream 292352 98782139 ~ 98783327 (+)
G1132093 NA other downstream 305971 98795758 ~ 98797512 (+)
G1132174 NA other downstream 484656 98974443 ~ 98974926 (+)

Expression


Co-expression Network