G1131972


Basic Information

Item Value
gene id G1131972
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 98495879 ~ 98497162 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1288391
TTAGCTGTATTTCCTGAGGGCTATAGGTAATAGTTAGCTGTATTTCCTGAGGGCTATAGGTAATAGTTAGCTGTATTTCCTGAGGGCTATAGGTAATAGTTAGCTGTATTTCCTGAGAGCTATAGGTAATAGTTAGCTGTATTTCCTGAGAGCTATAGGTAGTAGTTAGCTGTATTTCCTGAGGGCTATAGGTAGTAGTTAGCTGTATTTCCTGAGGGCTATAGGTAGTAGTTAGCTGTATTTCCTGAGGGCTATAGGTAGTAGTTAGCTGTATTTCCTGAGGGCTATAGGTAGTAGTTAGCTGTATTTCCTGAGGGCTATAGGTAATAGTTAGCTGTATTTCCTGAGAGCTATAGGTAATAGTTAGCTGTATTTCCTGAGGGCTATAGGTAGTAGTTAGCTGTATTTCCTGAGGGCTATAGGTAATAGTTAGCTGTATTTCCTGAGGGCTATAGGTAATAGTTAGCTGTATTTCCTGAGGGCTATAGGTAGTAGTTAGCTGTATTTCCTGAGGGCTATAGGTAATAGTTAGCTGTATTTCCTGAGGGCTATAAGTAGTTAGCTGTATTTCCTGAGGGCTATATGAGTTAATCGAGCAATTAGAAGCTCAACTCACTCTGCCTAGATATGTTGTCCACTACTAGATCTTCCTTGGTTTCAATTGGTTTTATTGTGATAGAAAATGTATCTGCTGGAAGCGCTTGTTGCTGTTTCCCGAAGCCCCTGCGCTCTGCCTAAGAAAACAGCTATCTTCATCATCTTCCTTTTCCGCCATATTGCTTTCCCCTATCCAGTCCTGTCAGATCTTCAATAGGGAGCGAACGAGGACAGGAAGAAAGACAAACTTCTGGAATGAAACATGGCCCAAGGTTGTGACCTCAGTAACCC

Function

NR:

description
PREDICTED: bile salt-activated lipase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1288391 True 888 lncRNA 0.42 6 98495879 98497162

Neighbor

gene id symbol gene type direction distance location
LOC110485331 ppl coding downstream 114967 98333131 ~ 98380912 (-)
LOC110517726 glyr1 coding downstream 178974 98283462 ~ 98316905 (-)
LOC110487128 rogdi coding downstream 212726 98265920 ~ 98283153 (-)
LOC118936513 cog1 coding downstream 236235 98230363 ~ 98259687 (-)
LOC110485327 LOC105012792 coding downstream 309590 98137074 ~ 98186289 (-)
LOC110487126 LOC106602016 coding upstream 69234 98566396 ~ 98571514 (-)
LOC110514497 LOC106602019 coding upstream 268943 98766105 ~ 98906443 (-)
LOC110539185 hgs coding upstream 484599 98981732 ~ 99019633 (-)
LOC110538838 LOC105029615 coding upstream 524796 99021958 ~ 99027957 (-)
btr02 LOC106606318 coding upstream 531006 99028168 ~ 99040834 (-)
G1131969 NA non-coding downstream 5832 98489007 ~ 98490047 (-)
G1131967 NA non-coding downstream 13606 98481515 ~ 98482273 (-)
G1131956 NA non-coding downstream 40743 98454517 ~ 98455136 (-)
G1131955 NA non-coding downstream 47321 98447279 ~ 98448558 (-)
G1131949 NA non-coding downstream 67221 98427991 ~ 98428658 (-)
G1131977 NA non-coding upstream 12097 98509259 ~ 98509702 (-)
G1131980 NA non-coding upstream 14429 98511591 ~ 98512278 (-)
G1131995 LOC106602015 non-coding upstream 63626 98560788 ~ 98561455 (-)
G1132001 NA non-coding upstream 78244 98575406 ~ 98576626 (-)
G1132012 NA non-coding upstream 117982 98615144 ~ 98617785 (-)
G1131863 NA other downstream 112064 98382970 ~ 98383815 (-)
LOC110485313 LOC106535622 other downstream 521159 97959753 ~ 97974748 (-)
G1131666 NA other downstream 635361 97857599 ~ 97860518 (-)
G1131720 NA other downstream 642286 97852786 ~ 97853593 (-)
G1132328 NA other upstream 509465 99006627 ~ 99010112 (-)
LOC118937838 LOC106606233 other upstream 556342 99052890 ~ 99059256 (-)
LOC110538840 LOC106601903 other upstream 594554 99090621 ~ 99092245 (-)
G1132564 NA other upstream 668786 99165948 ~ 99166607 (-)
G1132569 LOC106606209 other upstream 676503 99173665 ~ 99177478 (-)

Expression


Co-expression Network