Gene
RNA
| Item | Value |
|---|---|
| gene id | G1131917 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 98550773 ~ 98551130 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1288318 | True | 268 | lncRNA | 0.46 | 2 | 98550773 | 98551130 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936514 | smim22 | coding | upstream | 284746 | 98259570 ~ 98268855 (+) |
| LOC110516721 | LOC105012791 | coding | upstream | 332488 | 98187732 ~ 98218285 (+) |
| LOC118937837 | LOC106594247 | coding | upstream | 428695 | 98101643 ~ 98122078 (+) |
| LOC110485325 | LOC105012794 | coding | upstream | 460400 | 98065664 ~ 98090718 (+) |
| LOC110487112 | LOC106594630 | coding | upstream | 491322 | 98022211 ~ 98059451 (+) |
| LOC110516605 | LOC106592968 | coding | downstream | 425203 | 98976333 ~ 98977246 (+) |
| LOC110539183 | LOC106606365 | coding | downstream | 519866 | 99070996 ~ 99088300 (+) |
| epn3a | LOC105006167 | coding | downstream | 566271 | 99117401 ~ 99175955 (+) |
| LOC110538843 | LOC106601911 | coding | downstream | 631987 | 99183117 ~ 99188055 (+) |
| LOC110538844 | tbcd | coding | downstream | 637755 | 99188885 ~ 99322871 (+) |
| G1131901 | NA | non-coding | upstream | 60499 | 98489912 ~ 98490274 (+) |
| G1131900 | NA | non-coding | upstream | 60986 | 98489014 ~ 98489787 (+) |
| G1131898 | NA | non-coding | upstream | 67550 | 98481868 ~ 98483223 (+) |
| G1131889 | NA | non-coding | upstream | 88341 | 98460429 ~ 98462432 (+) |
| LOC110487124 | LOC105006040 | non-coding | upstream | 122323 | 98425760 ~ 98564239 (+) |
| G1131918 | NA | non-coding | downstream | 657 | 98551787 ~ 98552061 (+) |
| G1131919 | NA | non-coding | downstream | 7907 | 98559037 ~ 98559574 (+) |
| G1131920 | NA | non-coding | downstream | 8877 | 98560007 ~ 98560315 (+) |
| G1131921 | NA | non-coding | downstream | 13331 | 98564461 ~ 98565835 (+) |
| G1131929 | NA | non-coding | downstream | 25947 | 98577077 ~ 98577697 (+) |
| G1131438 | NA | other | upstream | 728716 | 97820724 ~ 97822057 (+) |
| G1130780 | LOC106606334 | other | upstream | 1387694 | 97162262 ~ 97163079 (+) |
| LOC118937804 | LOC106591169 | other | upstream | 1848836 | 96676774 ~ 96702725 (+) |
| G1130570 | alg1 | other | upstream | 1917321 | 96618256 ~ 96633452 (+) |
| G1132060 | NA | other | downstream | 173727 | 98724857 ~ 98725197 (+) |
| G1132058 | NA | other | downstream | 212829 | 98762440 ~ 98767257 (+) |
| G1132082 | NA | other | downstream | 231009 | 98782139 ~ 98783327 (+) |
| G1132093 | NA | other | downstream | 244628 | 98795758 ~ 98797512 (+) |
| G1132174 | NA | other | downstream | 423313 | 98974443 ~ 98974926 (+) |
