Gene
RNA
| Item | Value |
|---|---|
| gene id | G1131918 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 98551787 ~ 98552061 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1288319 | True | 255 | lncRNA | 0.29 | 2 | 98551787 | 98552061 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936514 | smim22 | coding | upstream | 285760 | 98259570 ~ 98268855 (+) |
| LOC110516721 | LOC105012791 | coding | upstream | 333502 | 98187732 ~ 98218285 (+) |
| LOC118937837 | LOC106594247 | coding | upstream | 429709 | 98101643 ~ 98122078 (+) |
| LOC110485325 | LOC105012794 | coding | upstream | 461414 | 98065664 ~ 98090718 (+) |
| LOC110487112 | LOC106594630 | coding | upstream | 492336 | 98022211 ~ 98059451 (+) |
| LOC110516605 | LOC106592968 | coding | downstream | 424272 | 98976333 ~ 98977246 (+) |
| LOC110539183 | LOC106606365 | coding | downstream | 518935 | 99070996 ~ 99088300 (+) |
| epn3a | LOC105006167 | coding | downstream | 565340 | 99117401 ~ 99175955 (+) |
| LOC110538843 | LOC106601911 | coding | downstream | 631056 | 99183117 ~ 99188055 (+) |
| LOC110538844 | tbcd | coding | downstream | 636824 | 99188885 ~ 99322871 (+) |
| G1131917 | NA | non-coding | upstream | 657 | 98550773 ~ 98551130 (+) |
| G1131901 | NA | non-coding | upstream | 61513 | 98489912 ~ 98490274 (+) |
| G1131900 | NA | non-coding | upstream | 62000 | 98489014 ~ 98489787 (+) |
| G1131898 | NA | non-coding | upstream | 68564 | 98481868 ~ 98483223 (+) |
| G1131889 | NA | non-coding | upstream | 89355 | 98460429 ~ 98462432 (+) |
| G1131919 | NA | non-coding | downstream | 6976 | 98559037 ~ 98559574 (+) |
| G1131920 | NA | non-coding | downstream | 7946 | 98560007 ~ 98560315 (+) |
| G1131921 | NA | non-coding | downstream | 12400 | 98564461 ~ 98565835 (+) |
| G1131929 | NA | non-coding | downstream | 25016 | 98577077 ~ 98577697 (+) |
| G1131932 | NA | non-coding | downstream | 31158 | 98583219 ~ 98583895 (+) |
| G1131438 | NA | other | upstream | 729730 | 97820724 ~ 97822057 (+) |
| G1130780 | LOC106606334 | other | upstream | 1388708 | 97162262 ~ 97163079 (+) |
| LOC118937804 | LOC106591169 | other | upstream | 1849850 | 96676774 ~ 96702725 (+) |
| G1130570 | alg1 | other | upstream | 1918335 | 96618256 ~ 96633452 (+) |
| G1132060 | NA | other | downstream | 172796 | 98724857 ~ 98725197 (+) |
| G1132058 | NA | other | downstream | 211898 | 98762440 ~ 98767257 (+) |
| G1132082 | NA | other | downstream | 230078 | 98782139 ~ 98783327 (+) |
| G1132093 | NA | other | downstream | 243697 | 98795758 ~ 98797512 (+) |
| G1132174 | NA | other | downstream | 422382 | 98974443 ~ 98974926 (+) |
