Gene
RNA
| Item | Value |
|---|---|
| gene id | G1131920 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 98560007 ~ 98560315 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1288322 | True | 220 | lncRNA | 0.43 | 2 | 98560007 | 98560315 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936514 | smim22 | coding | upstream | 293980 | 98259570 ~ 98268855 (+) |
| LOC110516721 | LOC105012791 | coding | upstream | 341722 | 98187732 ~ 98218285 (+) |
| LOC118937837 | LOC106594247 | coding | upstream | 437929 | 98101643 ~ 98122078 (+) |
| LOC110485325 | LOC105012794 | coding | upstream | 469634 | 98065664 ~ 98090718 (+) |
| LOC110487112 | LOC106594630 | coding | upstream | 500556 | 98022211 ~ 98059451 (+) |
| LOC110516605 | LOC106592968 | coding | downstream | 416018 | 98976333 ~ 98977246 (+) |
| LOC110539183 | LOC106606365 | coding | downstream | 510681 | 99070996 ~ 99088300 (+) |
| epn3a | LOC105006167 | coding | downstream | 557086 | 99117401 ~ 99175955 (+) |
| LOC110538843 | LOC106601911 | coding | downstream | 622802 | 99183117 ~ 99188055 (+) |
| LOC110538844 | tbcd | coding | downstream | 628570 | 99188885 ~ 99322871 (+) |
| G1131919 | NA | non-coding | upstream | 433 | 98559037 ~ 98559574 (+) |
| G1131918 | NA | non-coding | upstream | 7946 | 98551787 ~ 98552061 (+) |
| G1131917 | NA | non-coding | upstream | 8877 | 98550773 ~ 98551130 (+) |
| G1131901 | NA | non-coding | upstream | 69733 | 98489912 ~ 98490274 (+) |
| G1131900 | NA | non-coding | upstream | 70220 | 98489014 ~ 98489787 (+) |
| G1131921 | NA | non-coding | downstream | 4146 | 98564461 ~ 98565835 (+) |
| G1131929 | NA | non-coding | downstream | 16762 | 98577077 ~ 98577697 (+) |
| G1131932 | NA | non-coding | downstream | 22904 | 98583219 ~ 98583895 (+) |
| G1131942 | NA | non-coding | downstream | 55884 | 98616199 ~ 98617748 (+) |
| G1132019 | NA | non-coding | downstream | 100094 | 98660409 ~ 98660732 (+) |
| G1131438 | NA | other | upstream | 737950 | 97820724 ~ 97822057 (+) |
| G1130780 | LOC106606334 | other | upstream | 1396928 | 97162262 ~ 97163079 (+) |
| LOC118937804 | LOC106591169 | other | upstream | 1858070 | 96676774 ~ 96702725 (+) |
| G1130570 | alg1 | other | upstream | 1926555 | 96618256 ~ 96633452 (+) |
| G1132060 | NA | other | downstream | 164542 | 98724857 ~ 98725197 (+) |
| G1132058 | NA | other | downstream | 203644 | 98762440 ~ 98767257 (+) |
| G1132082 | NA | other | downstream | 221824 | 98782139 ~ 98783327 (+) |
| G1132093 | NA | other | downstream | 235443 | 98795758 ~ 98797512 (+) |
| G1132174 | NA | other | downstream | 414128 | 98974443 ~ 98974926 (+) |
