G1131921



Basic Information


Item Value
gene id G1131921
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 98564461 ~ 98565835 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1288324
CTAAATGGTTGTGTGAACTAGCAGCCACTCAACAGCTTGTGTCAGTCTTTAATTACATCACCATAACACTAGACACATCTGTGGGAtcatctggttctcctctccatcataacaggCTAACACTAGACACATCTGTGGGATCATCTGGTactcctctccatcataacagactaacACTAGACACATCTGTGGGATCATCTGGTTCTCCTTTCCATCATAACAGGCTAAtgatctggttctcctctccatcataacagactaatgatctggttctcctctccatcataacagactaatgatctggttctcctctccatcataacagactaaacatcatctggttctcctctccatcataacagactaatgATCTGGTTCTCCTTTCCATCATAACAGGCTAAtgatctggttctcctctccatcataacagactaaacatcatctggttctcctctccatcataacagactaatgatctggttctcctctccatcataacagactaatgatctggttctcctctccatcataacagactaatgatctggttctcctctccatcataacagactaatgatctggttcttctctccatcataacagactactgatctggttctcctctccatcataacagactaatgatctggttctcctctccatcataacagactaatgatctggttctcctctccatcataacagactaatgatctggttctcctctccatcataacagactaatgagctggttctcctctccatcataacagactaatgatctggttctcctctccatcataacagactaatgatctgattctcctctccatcataacagactaatgatctggttcttctctccatcataacagactaatgatctggttctcctctccatcataacagactactgatctggttctcctctccatcataacagactaatgatctggttctcctctccatcataacagactaatgatctggttctcctctccatcataacagactaacacatctggttctcctctccatcataacagactaatgatctggttctcctctccatcataacagactaatgatctggttctcctctccatcataacagactaatgatagacatcatctggttctcctctccatcataacagactactgatctggttctcctctccatcataacagactaattatctggttctcctctccatcataacagactagacatcatctggttctcctctccatcataacagactaatgatctggttctcctctccatcataacagactaatgatctggttctcctctccatcataacagactaatga

Function


NR:

description
uncharacterized protein LOC110511370

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1288324 True 1338 lncRNA 0.42 2 98564461 98565835

Neighbor


gene id symbol gene type direction distance location
LOC110487124 LOC105006040 coding upstream 222 98425760 ~ 98564239 (+)
LOC118936514 smim22 coding upstream 298434 98259570 ~ 98268855 (+)
LOC110516721 LOC105012791 coding upstream 346176 98187732 ~ 98218285 (+)
LOC118937837 LOC106594247 coding upstream 442383 98101643 ~ 98122078 (+)
LOC110485325 LOC105012794 coding upstream 474088 98065664 ~ 98090718 (+)
LOC110516605 LOC106592968 coding downstream 410498 98976333 ~ 98977246 (+)
LOC110539183 LOC106606365 coding downstream 505161 99070996 ~ 99088300 (+)
epn3a LOC105006167 coding downstream 551566 99117401 ~ 99175955 (+)
LOC110538843 LOC106601911 coding downstream 617282 99183117 ~ 99188055 (+)
LOC110538844 tbcd coding downstream 623050 99188885 ~ 99322871 (+)
G1131920 NA non-coding upstream 4146 98560007 ~ 98560315 (+)
G1131919 NA non-coding upstream 4887 98559037 ~ 98559574 (+)
G1131918 NA non-coding upstream 12400 98551787 ~ 98552061 (+)
G1131917 NA non-coding upstream 13331 98550773 ~ 98551130 (+)
G1131901 NA non-coding upstream 74187 98489912 ~ 98490274 (+)
G1131929 NA non-coding downstream 11242 98577077 ~ 98577697 (+)
G1131932 NA non-coding downstream 17384 98583219 ~ 98583895 (+)
G1131942 NA non-coding downstream 50364 98616199 ~ 98617748 (+)
G1132019 NA non-coding downstream 94574 98660409 ~ 98660732 (+)
G1132020 NA non-coding downstream 95666 98661501 ~ 98661711 (+)
G1131438 NA other upstream 742404 97820724 ~ 97822057 (+)
G1130780 LOC106606334 other upstream 1401382 97162262 ~ 97163079 (+)
LOC118937804 LOC106591169 other upstream 1862524 96676774 ~ 96702725 (+)
G1130570 alg1 other upstream 1931009 96618256 ~ 96633452 (+)
G1132060 NA other downstream 159022 98724857 ~ 98725197 (+)
G1132058 NA other downstream 198124 98762440 ~ 98767257 (+)
G1132082 NA other downstream 216304 98782139 ~ 98783327 (+)
G1132093 NA other downstream 229923 98795758 ~ 98797512 (+)
G1132174 NA other downstream 408608 98974443 ~ 98974926 (+)

Expression



Co-expression Network