G1132024


Basic Information

Item Value
gene id G1132024
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 98665117 ~ 98665431 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1288464
aacacattcataaccctacataacacattcataaccccacataacacattcataaccccacataacacattcataaccctacataacacattcataaccctacataacacattcataaccccacataacacattcataaccctacataacacattcataaccctacataacacattcataaccctacataacacattcataaccccacataacacattcataaccctacataacacattcataaccctacataacacattcataaccccacataacacattcataaccctacataacacattcataaccctacat

Function

NR:

description
splicing factor U2af large subunit A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1288464 True 315 lncRNA 0.35 1 98665117 98665431

Neighbor

gene id symbol gene type direction distance location
LOC110487124 LOC105006040 coding upstream 100878 98425760 ~ 98564239 (+)
LOC118936514 smim22 coding upstream 399090 98259570 ~ 98268855 (+)
LOC110516721 LOC105012791 coding upstream 446832 98187732 ~ 98218285 (+)
LOC118937837 LOC106594247 coding upstream 543039 98101643 ~ 98122078 (+)
LOC110485325 LOC105012794 coding upstream 574744 98065664 ~ 98090718 (+)
LOC110516605 LOC106592968 coding downstream 310902 98976333 ~ 98977246 (+)
LOC110539183 LOC106606365 coding downstream 405565 99070996 ~ 99088300 (+)
epn3a LOC105006167 coding downstream 451970 99117401 ~ 99175955 (+)
LOC110538843 LOC106601911 coding downstream 517686 99183117 ~ 99188055 (+)
LOC110538844 tbcd coding downstream 523454 99188885 ~ 99322871 (+)
G1132020 NA non-coding upstream 3406 98661501 ~ 98661711 (+)
G1132019 NA non-coding upstream 4385 98660409 ~ 98660732 (+)
G1131942 NA non-coding upstream 47369 98616199 ~ 98617748 (+)
G1131932 NA non-coding upstream 81222 98583219 ~ 98583895 (+)
G1131929 NA non-coding upstream 87420 98577077 ~ 98577697 (+)
G1132026 NA non-coding downstream 84 98665515 ~ 98666422 (+)
G1132029 NA non-coding downstream 3399 98668830 ~ 98669030 (+)
G1132036 NA non-coding downstream 16000 98681431 ~ 98681767 (+)
G1132037 NA non-coding downstream 16889 98682320 ~ 98682578 (+)
G1132053 NA non-coding downstream 48163 98713594 ~ 98713851 (+)
G1131438 NA other upstream 843060 97820724 ~ 97822057 (+)
G1130780 LOC106606334 other upstream 1502038 97162262 ~ 97163079 (+)
LOC118937804 LOC106591169 other upstream 1963180 96676774 ~ 96702725 (+)
G1130570 alg1 other upstream 2031665 96618256 ~ 96633452 (+)
G1132060 NA other downstream 59426 98724857 ~ 98725197 (+)
G1132058 NA other downstream 98528 98762440 ~ 98767257 (+)
G1132082 NA other downstream 116708 98782139 ~ 98783327 (+)
G1132093 NA other downstream 130327 98795758 ~ 98797512 (+)
G1132174 NA other downstream 309012 98974443 ~ 98974926 (+)

Expression


Co-expression Network